Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_015225.1 Length=35499 Score E Sequences producing significant alignments: (Bits) Value seq556156 187 6e-43 >seq556156 Length=560 Score = 187 bits (206), Expect = 6e-43 Identities = 212/278 (76%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 6491 CGGGCGGCCAGCGCCCGCTCGTAGGGGTTGAGCGGCGGCCCCCAGGGCATGGGGTGGGTG 6550 |||||| | ||||| |||||||| |||||||| || || ||||| ||||||||| ||| Sbjct 276 CGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTN 218 Query 6551 AGGGCCGAGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCCTCGAGG 6604 || || |||||||||||| | | | ||||| ||| | ||| ||||||| ||| Sbjct 217 AGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGT 158 Query 6605 ACGCCGATGTAGGTGGGGTAGCAGCGGCCGCCGCGGATGCTGGCGCGCACGTAGTCGTAC 6664 | || | || ||||| ||||| | || ||||||||||||||||||||||| ||||| Sbjct 157 ATTCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTAT 99 Query 6665 ATCTCGTGCGAGGGGGCCAGCAGGTCGGGCCCCAGGTGGGTGCGGGCGGGGCGCTCGGCG 6724 | ||||||||||| || || |||||||| || |||| | | |||||||| |||| || Sbjct 98 AGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCT 39 Query 6725 CGGTAGAGGATCTGGCGAAAGATGGCGTGGGAGTTGGA 6762 ||| || ||||| | |||||||| || |||||||| Sbjct 38 CGGAAG-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112616735360222