Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq325398 96.9 5e-15 >seq325398 Length=63999 Score = 96.9 bits (106), Expect = 5e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 197455 TCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTT 197514 ||||| ||||| ||||| |||||||| | ||||| | | | ||||||| ||||| Sbjct 48494 TCAAAGGCAAACACGCAGACCTGGACCTTGATCTCACCAGCATCTGCATCTTTCCGTTTC 48435 Query 197515 CTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCC 197574 || || || || |||||||||||||||||||||||| |||||| || || ||| Sbjct 48434 CTTGTACTCAAGACCTGGAAGGGAAGGATCTGCTTCTTCTCACGGTCCCATGCCACGGCC 48375 Query 197575 TCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGATTGGGGAAGCCT 197627 |||| || | |||| |||| || || | || |||| | | |||||||| Sbjct 48374 TCAGAATCAATGATGCAAGATTTGACATCGTCCTTGAGGGCTGATGGAAGCCT 48322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671340539962480