Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq34585 89.7 4e-13 >seq34585 Length=75490 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| |||||| ||||| ||||| |||||||| ||| | || || | ||| Sbjct 7927 ATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCAGATAGGGTTCTGCCATCCTCGAGCTG 7868 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || || || || || ||||| ||||| | || | ||||| ||||| ||||| Sbjct 7867 CTTGCCAGCGAAGATGAGACGCTGCTGATCTGGTGGGATACCCTCTTTGTCTTGGATCTT 7808 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | |||||| | | || || || ||||||||||| || || ||||| || || Sbjct 7807 TGCCTTTACATTTTCAATAGTGTCACTCGGCTCCACCTCCAATGTGATGGTTTTACCGGT 7748 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 7747 GAGGGTCTTGACGAAGATCTGCAT 7724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377979885120933