Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq618008 86.0 7e-12 >seq618008 Length=66792 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 160589 GTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAA 160648 |||| |||| | | | ||||||||| | || |||||| || ||||| ||||| || || Sbjct 15756 GTTGTGACCGCCAAAAGCTTTCAGCTGGTGGATGATCTCGAGATTCGTTTTGAGAGGGAA 15697 Query 160649 GTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCT 160708 ||| |||||| | ||| | ||||| ||||| || | | | | ||| || || Sbjct 15696 GTCTTGACCGCAGAGGTTCAAGACGTAATTCCACTTATGGTTGCGATTTATCAGATCACT 15637 Query 160709 CATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTT 160768 ||||||||| || || ||||||| || ||| || ||||| || || ||| || Sbjct 15636 CATGCAATTGATGTCGGCCTGCAGTCGACTCGAGTGCGCGTAGTTGACAGTCACTATCTT 15577 Query 160769 ACTGGCCACAAAGACGTTATCGAAACA 160795 ||| | |||||||| |||||||| Sbjct 15576 GGAGGCTATGAAGACGTTGTCGAAACA 15550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572622579837960