Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq556156 122 2e-23 >seq556156 Length=560 Score = 122 bits (134), Expect = 2e-23 Identities = 193/268 (72%), Gaps = 12/268 (4%) Strand=Plus/Minus Query 6468 GCTCGTTCATATGGACTTAAGGGGGCACCCCATGGCATAGGATGGGTTAAAGCTGAAGCG 6527 || || || ||||| | | |||| |||||||||||| || ||| | || || ||| Sbjct 265 GCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCGGAGGCG 206 Query 6528 TACATGCCGC----AAATGTCAT--AAACATAAATGGGCTC-CTGAAGTACTCCAATGTA 6580 |||||| | | ||||||| |||| | | |||||| |||| ||| ||||| || Sbjct 205 TACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGA-GTATTCCAAGATA 147 Query 6581 AGTTGGGTAACAGCGCCCTCCTCTGATGCTGGCGCGCACGTAGTCATAAAGCTCGTGTGA 6640 || ||||| || | || || | |||||||||||||||||| || || || ||||| || Sbjct 146 TGT-GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGA 88 Query 6641 GGGAGCCAGTAGGTGGCGACTGAGGTGCGCT-CGTTGTGATTTTTCTGCTCGGTAAAGAA 6699 |||||| || |||| | ||| ||||| ||| || | | ||||||||| || | Sbjct 87 GGGAGCGAGGAGGTCGGGACCGAGGT-TGCTACGGGCGGGCTGCTCTGCTCGG-AAGCTA 30 Query 6700 TTTGTCTAAAGATGGCATGAGAGTTGGA 6727 | || || ||||||||||| |||||||| Sbjct 29 TCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108815313171728