Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_020487.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq556156 132 1e-26 >seq556156 Length=560 Score = 132 bits (146), Expect = 1e-26 Identities = 199/274 (73%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 7190 GCCAGGGCCCGCTCGTAGGGGTTGAGGGGCGCCCCCGCGGGGAAGGGATGGGTGAGGGCG 7249 || || || |||||||| |||||||| || | ||| || | ||| ||| || ||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 7250 GAGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCCTCGAGGACGCCG 7303 |||||||||||| | | | ||||| ||| | ||| ||||||| ||| | || Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 7304 ATGAAGGTGGGGTAGCAGCGCCCCCCGCGGATGCTGGCGCGGACGTAGTCATACAACTCG 7363 | | ||||| ||||| | || ||||||||||||||||| ||||| || || | ||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 7364 TGGGAGGGGGCGAGGAGGACGGAGCCGAGGTGGGGTTTCTGG-GGGC-GCTCGGCTCGGT 7421 || ||||| ||||||||| ||| ||||||| | | | || |||| |||| |||||| Sbjct 92 TGCGAGGGAGCGAGGAGGTCGGGACCGAGGT--TGCTACGGGCGGGCTGCTCTGCTCGGA 35 Query 7422 AGACCACCTGGCGGAAGATGGCGTGGGAGTTGGA 7455 || | | ||| | ||||||||| || |||||||| Sbjct 34 AG-CTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116869119913600