Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq556156 107 4e-19 >seq556156 Length=560 Score = 107 bits (118), Expect = 4e-19 Identities = 189/272 (69%), Gaps = 8/272 (3%) Strand=Plus/Minus Query 6140 GCCAGAGCCCTCTCGTACGGATTAAGGGGAGGACCCCAAGGCATGGGGTGGGTAAGGGCG 6199 || || || | |||||| || || || || |||||||| ||||||||| ||| || ||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6200 GAAGCGTACATGCCAC----AAATGTCAT--AAACATAAAGAGGCTGGCGTAAAACGCCA 6253 || ||||||||| | | ||||||| |||| | | | |||| | | | ||| Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 6254 ATGTATGTAGGATAGCAACGTCCGCCGCGAATGCTGGCCCTGACGTAATCGTACATTTCA 6313 | ||||| || ||||| | ||| ||||| |||||||| | ||||||||||| | ||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 6314 TGGGAGGGTGCCAAAAGGCCGCTCCCCAGGTGGGTTTTTTGGGGTTTTACGGCGCGGTAG 6373 || ||||| || | ||| || || |||| | | ||| | | || ||| | Sbjct 92 TGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGG-AA 34 Query 6374 GCGATCTGTCGAAAGATGGCGTGGGAGTTGGA 6405 || ||||| | |||||||| || |||||||| Sbjct 33 GCTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109097958597606