Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq434814 113 4e-20 seq239345 113 4e-20 >seq434814 Length=32496 Score = 113 bits (124), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| || |||||||||||||| || || | |||| | || | |||||| |||||||| || Sbjct 30143 AGTTTCTGGGTTGTCACATTCAGGGCAGAGCACATATTTCCTGATGAAGCCATCAAGAAG 30084 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 || || | ||| | ||| || || |||||||||||||| || | || || |||| Sbjct 30083 ATCTTGCAGCTTGTTAGCGTCATGTGATCCGTTGACGATGAAGCGATTATTCTTAAAATC 30024 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | ||| ||||| || || |||||||| || ||||| ||||| || Sbjct 30023 AAACTGGGTTTGTGCACCAAGCTCGCAGCCAAAGTATTTTGTTGG 29979 >seq239345 Length=9917 Score = 113 bits (124), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| || |||||||||||||| || || | |||| | || | |||||| |||||||| || Sbjct 9153 AGTTTCTGGGTTGTCACATTCAGGGCAGAGCACATATTTCCTGATGAAGCCATCAAGAAG 9212 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 || || | ||| | ||| || || |||||||||||||| || | || || |||| Sbjct 9213 ATCTTGCAGCTTGTTAGCGTCATGTGATCCGTTGACGATGAAGCGATTATTCTTAAAATC 9272 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | ||| ||||| || || |||||||| || ||||| ||||| || Sbjct 9273 AAACTGGGTTTGTGCACCAAGCTCGCAGCCAAAGTATTTTGTTGG 9317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409636172804003