Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq556156 176 9e-40 >seq556156 Length=560 Score = 176 bits (194), Expect = 9e-40 Identities = 208/274 (76%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 6687 CGCCAGGGCGCGCTCGTAGGGGTTGAGGGGCGCCCCCCAGGGCATGGGATGGGTGAGGGC 6746 ||| || ||||||||||| |||||||| || | ||||| |||||||| ||| || || Sbjct 272 CGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGC 213 Query 6747 CGAGGCGTACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCGCGGAGCACGCC 6800 |||||||||||| | | | ||||| ||| | ||| ||||||| | ||| | || Sbjct 212 GGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCC 153 Query 6801 GAGGTAGGTGGGATAGCAGCGTCCGCCGCGGATGCTGGCGCGCACGTAGTCGTACATCTC 6860 || || ||||| ||||| | ||| ||||||||||||||||||||||| ||||| | || Sbjct 152 AAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTC 94 Query 6861 GTGCGAGGGGGCGAGGAGGCCGCCTCCGAGGTCGCCGCGCTGCGGTCTG-ACGGCCCGGT 6919 ||||||||| ||||||||| || ||||||| || || |||| ||| | || ||| Sbjct 93 GTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACG-GGCGGGCTGCTCTGCTCGGA 35 Query 6920 AGGTGACCTGGCGGAAGATGGCGTGCGAGTTGGA 6953 || | | ||| | ||||||||| || |||||||| Sbjct 34 AGCT-ATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101399840481558