Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq390013 120 8e-23 >seq390013 Length=546 Score = 120 bits (132), Expect = 8e-23 Identities = 193/268 (72%), Gaps = 12/268 (4%) Strand=Plus/Minus Query 18424 GCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGC 18483 ||||| | ||| ||| |||| ||||| ||||||||||||||||||| ||| ||||| Sbjct 526 GCGAACTCGCGAAACACGGGCATGTCGTGCAGCGCCTCTTCCATCGCCGGGTCGCTCAGC 467 Query 18484 CCGAACCATTGCTGCA-GAAAGTGGATGCGCAGCATCGTTTCGACTGGAAACGGCTTCCG 18542 ||||||| ||||| | | | || | ||||||||||| |||| | ||||||| ||| Sbjct 466 GCGAACCACTGCTGGACGGTAATGAACCCGCAGCATCGTCTCGATGGCAAACGGCGGCCG 407 Query 18543 ACCCG---TCGCCTTGACCGGCGCATGCGGCGCTATCAACGCCAAAAACGCCTGCCACGG 18599 |||| ||||||| || | | | |||| | | | || | |||| |||||| Sbjct 406 GCCCGTCTTCGCCTTCACGGTAG--TACGGCTTCACGATCTGCACCAGCGCCGACCACGG 349 Query 18600 CACCACACGTTCCATCTCAT-CCAGAAATACCTGCTTGCGCGTGCGTC--GGTTGCTCAG 18656 ||||| || |||||||| | |||||| | || |||||||||| | || || | ||| Sbjct 348 AACCACGCGCTCCATCTCCTCCCAGAACT-CCCGCTTGCGCGT-CTTCTTAGTCG-ACAG 292 Query 18657 GTCCAGGCCAAGGTCGCTTTGTTTCATG 18684 || |||||| || || ||| |||||| Sbjct 291 GTTCAGGCCCAGTCCGAGTTGCTTCATG 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126917323593128