Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq34585 104 5e-17 >seq34585 Length=75490 Score = 104 bits (114), Expect = 5e-17 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAA 206241 || ||||| || || ||||| |||||| |||| ||||| |||| ||||| | ||| Sbjct 7283 AAGACGCTAACTGGCAAAACCATCACTCTGGAGGTGGAGCCAAGT---GACACTATTGAA 7339 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 |||||| |||||| || || || || || || || || || | || ||| Sbjct 7340 AATGTAAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCAGATCAGCAGCGTCTCATC 7399 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| ||||||||| | || || || | || || | || |||||| ||||||||||| Sbjct 7400 TTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTGTCAGACTACAACATCCAGAAAGAG 7459 Query 206362 TCTACTCTTCACCTTGT 206378 ||||||||||| ||||| Sbjct 7460 TCTACTCTTCATCTTGT 7476 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| ||||| ||||| ||||| |||| Sbjct 7727 CAGATCTTCGTCAAGACCCTCACCGGTAAAACCATCACATTGGAGGTGGAGCCGAGTGAC 7786 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| |||||| ||||| ||||| || || || || || Sbjct 7787 ACTATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAGCAG 7846 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || ||||| || || | | || |||||| | Sbjct 7847 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGAACCCTATCTGACTACAACATT 7906 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||||||||| ||||| || |||||| Sbjct 7907 CAGAAAGAGTCCACTCTCCATCTTGTT 7933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1172174220589391