Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq556156 98.7 2e-16 >seq556156 Length=560 Score = 98.7 bits (108), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 7/213 (3%) Strand=Plus/Minus Query 6481 GGCCGCCAGCGCTCTTTCAAACGGATTAAgggggggTCCCCAAGGCATGGGGTGGGTAAG 6540 || ||| ||||| | || | || || || ||||| ||||| ||||||||| ||| || Sbjct 275 GGGCGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAG 216 Query 6541 TGCAGAAGCGTACATTCCGC----AAATGTCAT--ACACGTAGAGAGGTTCGTTGAGGAT 6594 || || |||||||| | | ||||||| | |||| | || || |||| || Sbjct 215 CGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTAT 156 Query 6595 GCCAATATAGGTGGGATAGCATCTTCCTCCGCGGATGCTGTTTCTTACATAGTCATAAAG 6654 |||| ||| ||||| ||||||||||| |||||||||||| | || || || || || Sbjct 155 TCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAG 97 Query 6655 TTCATGGGAGGGGGCCAGAAAATTGGGACCAAG 6687 ||| || ||||| || || | | |||||| || Sbjct 96 TTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103603839645146