Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq34585 98.7 9e-16 >seq34585 Length=75490 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| |||||||||||||| | ||| | ||| |||||||| || || | Sbjct 7917 GACTCTTTCTGAATGTTGTAGTCAGATAGGGTTCTGCCATCCTCGAGCTGCTTGCCAGCG 7858 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| |||||||| || || || ||||| || || ||| || | Sbjct 7857 AAGATGAGACGCTGCTGATCTGGTGGGATACCCTCTTTGTCTTGGATCTTTGCCTTTACA 7798 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| || |||||||||| || | || | |||||||| || || || || Sbjct 7797 TTTTCAATAGTGTCACTCGGCTCCACCTCCAATGTGATGGTTTTACCGGTGAGGGTCTTG 7738 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 7737 ACGAAGATCTGCAT 7724 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| || |||||| || |||||||| || || | Sbjct 7461 GACTCTTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCG 7402 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| |||||||| || || || || || || || ||| || | Sbjct 7401 AAGATGAGACGCTGCTGATCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTTACA 7342 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| || | |||||||| || | || | ||||| ||||| || || || Sbjct 7341 TTTTCAATAGTGTCACTTGGCTCCACCTCCAGAGTGATGGTTTTGCCAGTTAGCGTCTTC 7282 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 7281 ACGAAGATCTGCAT 7268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472815760327560