Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq601070 91.5 5e-15 seq572632 91.5 5e-15 seq439191 91.5 5e-15 seq222229 91.5 5e-15 seq31123 91.5 5e-15 seq25240 91.5 5e-15 seq22775 91.5 5e-15 seq383670 87.8 6e-14 seq88252 82.4 2e-12 seq41266 82.4 2e-12 seq629811 78.8 3e-11 seq321067 78.8 3e-11 seq266380 78.8 3e-11 seq173798 78.8 3e-11 seq154099 78.8 3e-11 seq101746 78.8 3e-11 seq63524 78.8 3e-11 >seq601070 Length=9865 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6238 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 6181 >seq572632 Length=21882 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 62 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 18249 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 18306 >seq439191 Length=31853 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6549 GCCGAACTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 6606 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7067 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 7124 >seq222229 Length=34574 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 17488 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 17431 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 19007 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 18950 >seq31123 Length=6481 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 109 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 166 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2005 ATCGCCGAAATACCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2064 Query 2826 A 2826 | Sbjct 2065 A 2065 >seq25240 Length=532 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 341 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 284 >seq22775 Length=30807 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 25290 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 25233 >seq383670 Length=8355 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| || ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4899 GCCGAAATACCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 4956 >seq88252 Length=30442 Score = 82.4 bits (90), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC-A 2825 |||| ||| |||| ||||||||||||| ||||| |||||||||||||| ||||||||| | Sbjct 4386 TGGC-GAAATAGCCCAGTTGGGAGAGCGTTAGATTGAAGATCTAAAGGCCCCTGGTTCAA 4444 Query 2826 ACCCCGG 2832 ||||||| Sbjct 4445 ACCCCGG 4451 >seq41266 Length=490 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| ||||||||||||| ||||||||||||||| || Sbjct 211 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATGTAAAGGTCCCTGGTTTAA 268 >seq629811 Length=35170 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 5131 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 5081 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 5867 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 5817 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 9083 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 9033 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 12597 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 12547 >seq321067 Length=540 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 517 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 467 >seq266380 Length=8628 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 8593 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 8543 >seq173798 Length=91151 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 68308 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 68358 >seq154099 Length=43385 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 32284 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 32234 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 34882 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 34832 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 40845 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 40795 >seq101746 Length=1578 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 1431 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 1381 >seq63524 Length=252 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 167 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15739160556795