Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq250674 86.0 2e-11 >seq250674 Length=71378 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/164 (72%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || ||||| ||||| ||||| | || ||| ||| || || || |||| Sbjct 3236 CGCCTTGTTGCATTTGCCGTGGTGGAAGGCATTTTTTTTT-CGGGTGCGTTTGCTGCCAT 3294 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 || ||| | |||||| | || ||| |||| | || ||| ||||||||||| || Sbjct 3295 ATTTTGGCTAAAAAAGAGAGGTAAATTGCCCGGTTTAACGTTTGCCAACGAACTGATAAG 3354 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 ||| || ||||| |||||||| || || || ||||| || |||| Sbjct 3355 TCGCGATGAGGGATTGCATTGTGATTTTGCGTGTCTCCTATACA 3398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1575371251575595