Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_028103.1 Length=32939 Score E Sequences producing significant alignments: (Bits) Value seq556156 122 2e-23 >seq556156 Length=560 Score = 122 bits (134), Expect = 2e-23 Identities = 158/216 (73%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 6536 GGCCGCTAGGGCTCTTTCGAACGGGTTAAGGGGAGGACCCCAAGGCATGGGATGAGTAAG 6595 || ||| || || | ||| | ||||| || || |||||||| |||||||| || || Sbjct 275 GGGCGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAG 216 Query 6596 AGCAGATGCGTACATTCCAC----AGATGTCAT--ACACATACAGGGGTTCGGTGAGTAC 6649 || || |||||||| | | | ||||| | || | |||| || |||||| Sbjct 215 CGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTAT 156 Query 6650 TCCGAGATAGGTGGGATAGCATCTTCCTCCCCGGATGCTGCTTCGCACGTAATCGTACAG 6709 ||| ||||| ||||| ||||||||||| || ||||||||| |||||||||||||| || Sbjct 155 TCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAG 97 Query 6710 TTCGTGGGAGGGAGCAAGGAAGTTAGGCCCCAAGTT 6745 |||||| |||||||| |||| || || || | ||| Sbjct 96 TTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTT 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104486709627102