Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_028105.1 Length=35159 Score E Sequences producing significant alignments: (Bits) Value seq556156 158 3e-34 >seq556156 Length=560 Score = 158 bits (174), Expect = 3e-34 Identities = 208/279 (75%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 6458 CGGGCGGCCAGCGCGCGCTCGTAGGGATTGAGCGGCGGTCCCCAGGGCATGGGATGGGTA 6517 |||||| | |||||||||||||| || ||||| || || ||||| |||||||| ||| Sbjct 276 CGGGCG-CAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTN 218 Query 6518 AGGGCCGAGGCATACATGCCGC----AGATGTC-GTAGA-CGTAGAGGGGCTCCTCCAGC 6571 || || ||||| |||||| | | | ||||| ||| | ||| ||||||| || Sbjct 217 AGCGCGGAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGT 158 Query 6572 ACGCCGATGTAAGTGGGGTAGCAGCGGCCGCCGCGGATGCTGGCGCGTACGTAATCGTAC 6631 | || | || ||||| ||||| | || ||||||||||||||||| ||||||||||| Sbjct 157 ATTCCAAGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTAT 99 Query 6632 ATCTCGTGCGAGGGGGCCAGCATGTCGGGTCCCAGGTTGGTGCGCCGCGGTC-GTTCCGC 6690 | ||||||||||| || || | |||||| || |||||| | || |||| | | || || Sbjct 98 AGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACG-GGCGGGCTGCTCTGC 40 Query 6691 CCGGTACAGGATCTGTCTGAAGATGGCGTGGGAGTTGGA 6729 ||| | ||||| ||||||||||| || |||||||| Sbjct 39 TCGG-AAGCTATCTGCCTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111536966317542