Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_028113.1 Length=35685 Score E Sequences producing significant alignments: (Bits) Value seq556156 150 4e-32 >seq556156 Length=560 Score = 150 bits (166), Expect = 4e-32 Identities = 189/254 (74%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 6499 GGATTCAGCGGAGGGCCCCAGGGCATGGGGTGGGTGAGGGCAGAGGCGTACATGCCGC-- 6556 || || || || || ||||| ||||||||| ||| || || |||||||||||| | | Sbjct 253 GGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCGGAGGCGTACATGGCCCGA 194 Query 6557 --AGATGTC-GTAAA-CGTAGAGGGGCTCCTCGAGAACTCCGATGTAGGTGGGGTAGCAG 6612 | ||||| ||||| ||| ||||||| ||| | ||| | || ||||| ||||| Sbjct 193 CTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCAAGATATGTGGG-TAGCAT 135 Query 6613 CGCCCTCCGCGAATACTGGCGCGCACGTAATCGTACATCTCGTGCGAGGGGGCCAGCAGG 6672 | || ||||| || |||||||||||||||||||| | ||||||||||| || || ||| Sbjct 134 CTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAGGGAGCGAGGAGG 75 Query 6673 TTGTGGCCCAGGTTGGTGCGGGCCGGCCGCTCGGCGCGGTAAAGGATCTGGCGAAAAATG 6732 | | | || |||||| | ||||| ||| |||| || ||| || ||||| | || ||| Sbjct 74 TCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGG-AAGCTATCTGCCTGAAGATG 16 Query 6733 GCGTGGGAGTTGGA 6746 || || |||||||| Sbjct 15 GCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113207432542394