Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq61311 109 4e-19 >seq61311 Length=60834 Score = 109 bits (120), Expect = 4e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 30305 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCA 30364 || ||||||||||||||||||| || ||||| | ||||| || || | | |||||| Sbjct 47426 CCTCTCTTGTCCAAAAAGTCTCGCGACCCGTTCCCCTCCCAAATTTTGATCTTCTTCTCC 47367 Query 30365 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30424 ||||| || | | || || || |||| || |||||||||||| ||||| ||| | || Sbjct 47366 GAGAGTTCGTGGCCATTAGTTGAACCTCGGATGAACCACAGCAGTTCCTCAGCGATGCCC 47307 Query 30425 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTG 30462 |||| || || | ||| || ||||| || |||||||| Sbjct 47306 CTCCAGAACACACGCTTTGTGGTGAGAAGTGGAAACTG 47269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403155683018532