Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_029898.1 Length=37545 Score E Sequences producing significant alignments: (Bits) Value seq556156 96.9 8e-16 >seq556156 Length=560 Score = 96.9 bits (106), Expect = 8e-16 Identities = 108/143 (76%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 6694 GGGTAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCGTAGAGCTCCATGGAGGGT 6753 ||||| || | || ||||||||||||||||||||||| ||||| || || ||||| Sbjct 143 GGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCGAGGGA 84 Query 6754 GCGAGCAGGACGCTGCCGAGGTTGGCGCGGTTGGGTCGCTCGGCCCGGTAGACCACCTGG 6813 ||||| ||| || ||||||||| ||| ||| |||| || ||| || | | ||| Sbjct 83 GCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAG-CTATCTGC 25 Query 6814 CGGAAGATGGCGTGGGAGTTGGA 6836 | ||||||||| || |||||||| Sbjct 24 CTGAAGATGGCATGTGAGTTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119114404364114