Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq556156 107 4e-19 >seq556156 Length=560 Score = 107 bits (118), Expect = 4e-19 Identities = 144/194 (74%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 6292 CGCGCGGTCGTATGGGTTGAGCGGGT-ACCCGGCGGGAAAGGGGTGTGTGAGCGCGCTGG 6350 |||||| |||||||||||||| ||| |||| || | |||||| || |||||| || Sbjct 266 CGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTG-GTNAGCGCGGAGG 208 Query 6351 CATACATGCCGC----AGATGTC-GTAGA-CGTAGACGGGCTCTGAGAGCACGCCTATGT 6404 | |||||| | | | ||||| ||| | ||| ||||||| ||| | || | | Sbjct 207 CGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCAAGAT 148 Query 6405 AAGTGGGGTAGCATCGGCCGCCGCGGATGCTGGCGCGCACGTACTCGTACATCTCGTGGG 6464 | ||||| ||||||| || ||||||||||||||||||||||| ||||| | ||||| | Sbjct 147 ATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 89 Query 6465 ACGGGGCCAGGAGG 6478 | || || |||||| Sbjct 88 AGGGAGCGAGGAGG 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103695937592904