Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq34585 150 4e-31 seq133437 122 2e-22 seq269770 91.5 3e-13 seq616859 86.0 1e-11 seq426772 86.0 1e-11 seq307818 86.0 1e-11 seq285030 86.0 1e-11 seq268276 86.0 1e-11 seq265900 86.0 1e-11 seq186240 86.0 1e-11 seq180316 86.0 1e-11 seq156656 86.0 1e-11 seq135133 86.0 1e-11 seq92897 86.0 1e-11 >seq34585 Length=75490 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || ||||| | || ||||| |||||||||||||| | Sbjct 7495 ACCACCACGGAGACGAAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAGTCTGA 7436 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || || ||||| | ||| || || || || Sbjct 7435 CAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGG 7376 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| ||||||||||| ||||| | || |||||||| | || || Sbjct 7375 GATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTTTCAATAGTGTCACTTGGCTCCAC 7316 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || || || || | ||||| ||||| |||||||| Sbjct 7315 CTCCAGAGTGATGGTTTTGCCAGTTAGCGTCTTCACGAAGATCTGCAT 7268 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | ||| ||||| || ||||||||||||| Sbjct 7950 CCACCACGGAGACGGAGAACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAT 7891 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||||||| || || || || || ||||| | ||| || || || || Sbjct 7890 AGGGTTCTGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGTGGG 7831 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| ||||||||||||||||| ||||| | || |||||||| | || || Sbjct 7830 ATACCCTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATAGTGTCACTCGGCTCCACC 7771 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || ||||| || | ||||| ||||| |||||||| Sbjct 7770 TCCAATGTGATGGTTTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 7724 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || ||||| | || || || ||||| |||||||| | Sbjct 7267 ACCACCACGGAGACGAAGCACAAGATGAAGAGTTGACTCCTTCTGGATATTGTAGTCTGA 7208 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || || ||||| | ||| || || || || Sbjct 7207 CAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGG 7148 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||| ||||||||||||||||| ||||| | || |||||||| | || || Sbjct 7147 GATACCCTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATAGTGTCACTTGGCTCCAC 7088 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || || || || | ||||| ||||| |||||||| Sbjct 7087 CTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 7040 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || ||| || ||||| |||||||| | Sbjct 7039 ACCACCACGGAGACGCAACACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAGTCTGA 6980 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||| | ||| || || || || Sbjct 6979 CAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGTGG 6920 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| |||||||||||||| ||| | ||||| || || | || || Sbjct 6919 GATACCTTCCTTGTCCTGGATCTTTGCTTTCACGTTTTCGATGGTATCGCTGGGCTCTAC 6860 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 6859 CTCTAGTGTGATGGTCTTGCCAGTGAGCGTCTTCACGAAGATCTGCAT 6812 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || || || ||||| |||||||||| Sbjct 6811 ACCACCACGGAGACGCAACACAAGATGAAGTGTTGACTCCTTCTGGATATTGTAGTCAGA 6752 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||| | || || || ||| || Sbjct 6751 CAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGTCGCTGCTGATCAGGTGG 6692 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| |||||||| || || || | || || || || || |||||| Sbjct 6691 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTATCACTAGGTTCGAC 6632 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||| || || || |||||||| Sbjct 6631 CTCAAGTGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 6584 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || || || ||||| |||||||| | Sbjct 7723 ACCACCACGGAGACGCAACACGAGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGA 7664 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||| | ||| || || || ||| Sbjct 7663 CAGGGTACGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGATCTGGCGG 7604 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| |||||||||||||| || | ||||| || || | || || Sbjct 7603 GATACCTTCCTTGTCCTGGATCTTTGCTTTCACATTTTCGATGGTATCACTGGGCTCTAC 7544 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| || || |||||||| Sbjct 7543 CTCTAATGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 7496 >seq133437 Length=111544 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | || || ||||| | ||| | ||||| || ||||||||||||| Sbjct 106792 CCACCACGAAGATGGAGCACAAGATGGAGAGTGGTCTCTTTCTGAATGTTGTAGTCAGAC 106733 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||||||| || || || || || ||||| | ||| || || | | Sbjct 106732 AGGGTTCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATGTGGTTGG 106673 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| | |||||||||||| || ||||| | || ||| |||| | || || Sbjct 106672 ATACCCTCTTCGTCTTGGATCTTCGCCTTTACATTTTCAATAATGTCACTTGGCTCCACC 106613 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || ||||| || | ||||| ||||| || ||||| Sbjct 106612 TCCAGTGTGATGGTTTTACCGGTGAGGGTCTTGACGAAGATTTGCAT 106566 >seq269770 Length=105173 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | ||||| ||||| | || || || |||||||||||||| | Sbjct 72027 CCACCACGGAGCCTCAGTACGAGATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAC 71968 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||||||||| || || || || || |||||||||| ||| || |||||| ||| Sbjct 71967 AGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 71908 Query 282993 ATACC 282997 || || Sbjct 71907 ATGCC 71903 >seq616859 Length=87182 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 22849 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 22793 >seq426772 Length=17324 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 12680 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 12736 >seq307818 Length=686 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 70 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 14 >seq285030 Length=905 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 113 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 57 >seq268276 Length=1158 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 647 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 591 >seq265900 Length=51123 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 13904 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 13960 >seq186240 Length=16638 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 7667 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 7723 >seq180316 Length=35179 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 23995 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 23939 >seq156656 Length=67780 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | ||||| ||||| | ||| || || || ||||||||||| | Sbjct 29890 CCACCACGGAGCCTCAGTACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTGAC 29831 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || || |||||||||| ||| || |||||| ||| Sbjct 29830 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 29771 Query 282993 ATACC 282997 || || Sbjct 29770 ATGCC 29766 >seq135133 Length=8508 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 8424 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 8368 >seq92897 Length=41147 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 6063 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 6119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1038195220392434