Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq556156 96.9 7e-16 >seq556156 Length=560 Score = 96.9 bits (106), Expect = 7e-16 Identities = 143/199 (72%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 6444 GCCAGGGCCCGCTCGTAGGGACTCAGGGGCGCCCCCCACGGCATGGGGTGTGTCAGCGCC 6503 || || || |||||||| || | || || | ||||| ||||||||| || ||||| Sbjct 271 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGGTGGTNAGCGCG 212 Query 6504 GAAGCATACAT--CCCGC--AGATGTCAT--ACACGTACAGGGGCTCGCGGAGGACGCCC 6557 || || ||||| |||| | ||||| | |||| ||||||| | ||| | || Sbjct 211 GAGGCGTACATGGCCCGACTAAATGTCCGTAAAACGTGAGGGGGCTCTCTGAGTATTCCA 152 Query 6558 ATGTAGGTGGGGTAACAGCGCCCCCCTCTGATGCTGGCCCGCACGTAATCGTACAGTTCG 6617 | || ||||| || || | || || | ||||||||| |||||||||||||| |||||| Sbjct 151 AGATATGTGGG-TAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 93 Query 6618 TGGGAGGGGGCTAGCAGGT 6636 || ||||| || || |||| Sbjct 92 TGCGAGGGAGCGAGGAGGT 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106465227608248