Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3597 120 6e-22 seq1713 120 6e-22 seq3992 93.3 9e-14 seq145 93.3 9e-14 seq1298 91.5 3e-13 seq425 91.5 3e-13 seq3947 89.7 1e-12 seq2006 89.7 1e-12 seq1796 87.8 4e-12 seq3 84.2 5e-11 >seq3597 Length=814645 Score = 120 bits (132), Expect = 6e-22 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC 230454 ||||| ||| | | |||||||||||| ||| || ||||||||| || |||| Sbjct 810232 GAAGCTGTTAACATTGAAAAGGAGTTCTGGACTGATGCCCTTCCATGTCATCTCCTTGGA 810173 Query 230455 ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCA 230514 |||||| | | |||||||| || ||||| ||||| || | ||| | | ||||||| Sbjct 810172 ATGAACAGTAACCTTATGGGTCAATACATTGAATTTGTGTCTGACAGATTGCTTGTTGCC 810113 Query 230515 CTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCG 230574 ||||||| || |||||| || | ||||| ||| |||||||||| |||||| Sbjct 810112 CTTGGTTTTACAAAGGTGTACCACACAGGAAACCCATTTACATTTATGGAAAACATTTCA 810053 Query 230575 CTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTG 230634 ||| |||| ||| | |||||||| || || || || || ||||||| |||||| Sbjct 810052 CTTGAAGGAAAGGCTAACTTCTTTGAGAARCGAGTAGCAGAGTATCAGAAAAATGGTGTC 809993 Query 230635 ATG 230637 ||| Sbjct 809992 ATG 809990 >seq1713 Length=288524 Score = 120 bits (132), Expect = 6e-22 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC 230454 ||||| ||| | | |||||||||||| ||| || ||||||||| || |||| Sbjct 285689 GAAGCTGTTAACATTGAAAAGGAGTTCTGGACTGATGCCCTTCCATGTCATCTCCTTGGA 285748 Query 230455 ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCA 230514 |||||| | | |||||||| || ||||| ||||| || | ||| | | ||||||| Sbjct 285749 ATGAACAGTAACCTTATGGGTCAATACATTGAATTTGTGTCTGACAGATTGCTTGTTGCC 285808 Query 230515 CTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCG 230574 ||||||| || |||||| || | ||||| ||| |||||||||| |||||| Sbjct 285809 CTTGGTTTTACAAAGGTGTACCACACAGGAAACCCATTTACATTTATGGAAAACATTTCA 285868 Query 230575 CTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTG 230634 ||| |||| ||| | |||||||| || || || || || ||||||| |||||| Sbjct 285869 CTTGAAGGAAAGGCTAACTTCTTTGAGAARCGAGTAGCAGAGTATCAGAAAAATGGTGTC 285928 Query 230635 ATG 230637 ||| Sbjct 285929 ATG 285931 >seq3992 Length=718424 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 108902 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 108961 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 108962 GCCCCACGTTGGGC 108975 >seq145 Length=572877 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 309674 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 309615 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 309614 GCCCCACGTTGGGC 309601 >seq1298 Length=355974 Score = 91.5 bits (100), Expect = 3e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 165697 ACTTAAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGT 165756 |||| | || | ||||| ||||||||||||||||||| ||||| ||||||| ||| Sbjct 247286 ACTTTTACCGATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGT 247227 Query 165757 CGTGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||||| ||||| Sbjct 247226 CGTGGGTTCGAGCCCCACGTTGGGC 247202 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 248471 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 248412 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 248411 CCCCACGTTGGGC 248399 >seq425 Length=1148405 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 814723 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 814664 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 814663 CCCCACGTTGGGC 814651 >seq3947 Length=737543 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 51127 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 51186 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 51187 CCCACGTTGGGC 51198 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 51874 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 51933 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 51934 CCCACGTTGGGC 51945 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 56716 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 56657 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 56656 CCCACGTTGGGC 56645 >seq2006 Length=936319 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 469889 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 469948 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 469949 CCCACGTTGGGC 469960 >seq1796 Length=279937 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 53813 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 53754 Query 165769 CCCCACGATGGGC 165781 ||||| ||||| Sbjct 53753 TCCCACATTGGGC 53741 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 54520 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 54461 Query 165769 CCCCAC 165774 ||||| Sbjct 54460 TCCCAC 54455 >seq3 Length=601523 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 21403 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 21344 Query 165769 CCCCAC 165774 ||||| Sbjct 21343 TCCCAC 21338 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 24010 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 23951 Query 165769 CCCCAC 165774 ||||| Sbjct 23950 TCCCAC 23945 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 24740 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 24681 Query 165769 CCCCAC 165774 ||||| Sbjct 24680 TCCCAC 24675 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 26937 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 26878 Query 165769 CCCCAC 165774 ||||| Sbjct 26877 TCCCAC 26872 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 28329 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 28270 Query 165769 CCCCAC 165774 ||||| Sbjct 28269 TCCCAC 28264 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 29131 TGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCAAG 29072 Query 165769 CCCCAC 165774 ||||| Sbjct 29071 TCCCAC 29066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057765557868560