Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1713 176 5e-39 seq3597 170 2e-37 >seq1713 Length=288524 Score = 176 bits (194), Expect = 5e-39 Identities = 468/710 (66%), Gaps = 12/710 (2%) Strand=Plus/Minus Query 15926 ACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAA- 15984 || || || || |||||||||| ||||| || | || || ||||||||||| ||| Sbjct 285903 ACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAAT 285844 Query 15985 GGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTAC 16044 ||| || | || | | ||| | | || || | || ||||| || | || Sbjct 285843 GGGTTTCCTGTGTGGTAC-ACCTTTGTAAAACCAAGGGCAACAAGCAATCTGTCAGACAC 285785 Query 16045 AAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGC 16104 |||||| || ||||||| ||| | || | || ||||| | || | ||||| || Sbjct 285784 AAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCAAGGAGATGACATGGAAGGGC 285725 Query 16105 TTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGT 16164 | || | || | | ||| || ||| ||||| ||| || || | | |||| Sbjct 285724 ATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGC 285665 Query 16165 TTCAGACGGTGTATGGTTTAGGTGTTTA---AACATTAGACACGCGAAGTCGCAATGTAG 16221 ||||| ||| | | | | || |||| ||||| | || || || || || || || Sbjct 285664 TTCAGTKGGTTTRTTGATAAG---TTTAGAGAACATCAAGCATGCAAAATCACAGTGAAG 285608 Query 16222 TCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTT 16281 ||||| ||||||||||| ||||| || || ||||| ||||| | | || || || Sbjct 285607 ACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTT 285548 Query 16282 CTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 || ||||||||||| || ||||||| || |||||||| || |||||||| | ||||| Sbjct 285547 TTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAA 285488 Query 16342 AGCGATTAATCGTTCCGCGTACGTAGCA-TCTTT-ATTACGAATCCATTTCTGTACCCAT 16399 || | | || ||| | | | |||| |||| | | |||||| || |||| Sbjct 285487 TGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACT--TAATCCACTTAATAGACCAT 285430 Query 16400 TCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCC 16459 | || |||| | | |||| | || || || || ||||| || || | ||||| Sbjct 285429 CCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGCATTAAATAACTTATTCTTTTCT 285370 Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519 | |||| | || || |||||||||| | |||||||||||| ||||| || ||||| Sbjct 285369 TCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACATTTCGGAGTGGATATTCTCC 285310 Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579 || | | ||||| ||||| || |||| || || || ||||||||| | | ||| Sbjct 285309 ATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAAT 285250 Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 | ||| | || || || || || || || || || |||||||| || Sbjct 285249 CTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCTGCAAAAAAGGC 285200 >seq3597 Length=814645 Score = 170 bits (188), Expect = 2e-37 Identities = 467/710 (66%), Gaps = 12/710 (2%) Strand=Plus/Plus Query 15926 ACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAA- 15984 || || || || |||||||||| ||||| || | || || ||||||||||| ||| Sbjct 810018 ACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAAT 810077 Query 15985 GGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTAC 16044 ||| || | || | | ||| | | || || | || ||||| || | || Sbjct 810078 GGGTTTCCTGTGTGGTAC-ACCTTTGTAAAACCAAGGGCAACAAGCAATCTGTCAGACAC 810136 Query 16045 AAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGC 16104 |||||| || ||||||| ||| | || | || ||||| | || | ||||| || Sbjct 810137 AAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCAAGGAGATGACATGGAAGGGC 810196 Query 16105 TTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGT 16164 | || | || | | ||| || ||| ||||| ||| || || | | |||| Sbjct 810197 ATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGC 810256 Query 16165 TTCAGACGGTGTATGGTTTAGGTGTTTA---AACATTAGACACGCGAAGTCGCAATGTAG 16221 ||||| ||| | | | | || |||| ||||| | || || || || || || || Sbjct 810257 TTCAGTKGGTTTRTTGATAAG---TTTAGAGAACATCAAGCATGCAAAATCACAGTGAAG 810313 Query 16222 TCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTT 16281 ||||| ||||||||||| ||||| || || ||||| ||||| | | || || || Sbjct 810314 ACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTT 810373 Query 16282 CTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 || ||||||||||| || ||||| | || |||||||| || |||||||| | ||||| Sbjct 810374 TTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAA 810433 Query 16342 AGCGATTAATCGTTCCGCGTACGTAGCA-TCTTT-ATTACGAATCCATTTCTGTACCCAT 16399 || | | || ||| | | | |||| |||| | | |||||| || |||| Sbjct 810434 TGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACT--TAATCCACTTAATAGACCAT 810491 Query 16400 TCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCC 16459 | || |||| | | |||| | || || || || ||||| || || | ||||| Sbjct 810492 CCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGCATTAAATAACTTATTCTTTTCT 810551 Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519 | |||| | || || |||||||||| | |||||||||||| ||||| || ||||| Sbjct 810552 TCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACATTTCGGAGTGGATATTCTCC 810611 Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579 || | | ||||| ||||| || |||| || || || ||||||||| | | ||| Sbjct 810612 ATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAAT 810671 Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 | ||| | || || || || || || || || || |||||||| || Sbjct 810672 CTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCTGCAAAAAAGGC 810721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511386834763840