Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1713 311 1e-79 seq3597 302 5e-77 seq25 136 5e-27 seq628 102 1e-16 >seq1713 Length=288524 Score = 311 bits (344), Expect = 1e-79 Identities = 625/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Minus Query 23822 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 23881 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 23882 TTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCT 23941 || ||||| | ||| || |||||||| || |||| || | || | | Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 | |||| || | || || |||||| || | ||||| || || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 24060 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 24120 | || || || ||||| || || | ||||| | ||| | | ||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 285645 Query 24121 GTTTA---AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATT 24177 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 24178 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 24237 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 24238 ATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC 24297 ||| |||||||||||||| || || ||||| ||||| || | | |||||||||| | Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAAT- 285466 Query 24298 CGGCGCTGTCATGTA-----TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 | || ||| | | ||||||| || ||| | ||||| || | |||||||| Sbjct 285465 -GAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 285407 Query 24353 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 24412 | || || ||||||||||| | | || ||||| | |||| || | || ||||| Sbjct 285406 GAAKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 285347 Query 24413 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 24472 |||||||||||| |||||||| || || || || || || | || |||||| || || || Sbjct 285346 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 285287 Query 24473 ACATCTAGCCTCG-GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCA 24531 |||||| || || ||| | ||||||||| || |||| ||| | | |||||| | Sbjct 285286 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 285228 Query 24532 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 24591 | ||||| || |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 285227 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 285169 Query 24592 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 24650 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 285168 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 285109 Query 24651 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 24710 | || || ||| || || || | || ||| | ||| ||| ||||||||||| | Sbjct 285108 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 285049 Query 24711 ACAAATCTATTTGGATT 24727 ||||| |||| |||||| Sbjct 285048 ACAAACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 302 bits (334), Expect = 5e-77 Identities = 624/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Plus Query 23822 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 23881 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 23882 TTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCT 23941 || ||||| | ||| || |||||||| || |||| || | || | | Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 | |||| || | || || |||||| || | ||||| || || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 24060 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 24120 | || || || ||||| || || | ||||| | ||| | | ||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 810276 Query 24121 GTTTA---AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATT 24177 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 24178 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 24237 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 24238 ATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC 24297 | | |||||||||||||| || || ||||| ||||| || | | |||||||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAAT- 810455 Query 24298 CGGCGCTGTCATGTA-----TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 | || ||| | | ||||||| || ||| | ||||| || | |||||||| Sbjct 810456 -GAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 810514 Query 24353 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 24412 | || || ||||||||||| | | || ||||| | |||| || | || ||||| Sbjct 810515 GAAGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 810574 Query 24413 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 24472 |||||||||||| |||||||| || || || || || || | || |||||| || || || Sbjct 810575 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 810634 Query 24473 ACATCTAGCCTC-GGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCA 24531 |||||| || || ||| | ||||||||| || |||| ||| | | |||||| | Sbjct 810635 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 810693 Query 24532 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 24591 | ||||| || |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 810694 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 810752 Query 24592 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 24650 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 810753 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 810812 Query 24651 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 24710 | || || ||| || || || | || ||| | ||| ||| ||||||||||| | Sbjct 810813 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 810872 Query 24711 ACAAATCTATTTGGATT 24727 ||||| |||| |||||| Sbjct 810873 ACAAACCTATGTGGATT 810889 >seq25 Length=601041 Score = 136 bits (150), Expect = 5e-27 Identities = 240/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 || ||||| ||||| |||||||| ||| ||| || || || || || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388 ||||| | ||| ||| || | || ||||||||||| || || || ||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448 | | | |||||||||||||| || | | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508 || || || || |||||||| ||||| | |||||||| ||||| || || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568 || ||| || || || ||||| | ||| | ||| ||||| || | |||| | | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 54569 TTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618 ||| || || || |||| ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 53437 TAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT 53496 ||||||| | || |||| |||||| ||||| || ||| |||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 53497 ATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 53556 ||||| | ||| | | |||||||| || || || | ||||| ||||||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 53557 AGGTCTATGTCTCTTATTAGA 53577 ||||| || ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| ||| ||||||| ||||||||||||| |||||||| | |||||||| |||| | Sbjct 246100 CACTGAATTGTTTTTTGGTTTCTTTGTGTAAGTTTGATACTTCAATTCTAGCTGCTAACA 246041 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||| || ||||| | |||||| | ||||| ||||| || | |||||||||| Sbjct 246040 ATGCATAGTCAGGATGCTTTGTAGTCATGGATGCTGCAATTTCTGCAGCAAGAGTGTCCA 245981 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 54935 ||| || | ||||| ||||| || || | ||| | || |||| Sbjct 245980 GTTCAGTTGTCTTGACTCCTTTATAGATACCCTTTATAGCTTTAATAG 245933 >seq628 Length=1115932 Score = 102 bits (112), Expect = 1e-16 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 ||||||||| || |||||||| || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 |||| || | ||| |||| || || |||||||||||| || || ||| | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 24083 AGATCTTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCG 24140 | | |||||||| || || || ||| || |||| | ||||||||||||| Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTAC--TAGGTGTTCATACATCAAACATGCA 723999 Query 24141 AAATCGCAGTGTAGACCCT 24159 || || || || || |||| Sbjct 724000 AAGTCACAATGGAGTCCCT 724018 Score = 102 bits (112), Expect = 1e-16 Identities = 167/239 (70%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 24213 TTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCA 24272 || || ||||| || || | ||||| || || ||||||||||||||||| || || ||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 24273 AAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAA 24329 ||||||| | |||||| || | | || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 24330 TCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttt-tttC 24388 | || ||||| |||| || | ||| | |||||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 24389 ATT--ACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445 || ||| |||| ||| | || ||||||||||| ||||| || || || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593689598405760