Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3803 131 2e-25 >seq3803 Length=782546 Score = 131 bits (144), Expect = 2e-25 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || | ||||| |||||||| ||| | || |||||| | | Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | | || ||| |||| |||||||| ||||||||| | ||||| Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||| | || || ||||| || || || | || || | | ||||||||| Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAA 742701 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| || ||||| || || | ||||| || || Sbjct 742702 CATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGG 742749 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || || ||||| | || |||||| | | | Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | ||| ||||||| |||||||| |||||||| | ||||| Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAAATTCAGGACAAAGAAGGCATCCCGCCAGACCAA 742414 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || |||||||| || || | || || | | |||||||||| Sbjct 742415 CAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAAC 742474 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || || || | ||||| || || Sbjct 742475 ATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAGGTTGAGAGGAGG 742521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515191429685120