Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4158 114 1e-20 seq3929 113 5e-20 seq998 113 5e-20 seq322 113 5e-20 seq1736 109 6e-19 seq1339 109 6e-19 seq3803 87.8 2e-12 >seq4158 Length=648639 Score = 114 bits (126), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||| Sbjct 107081 AAATCCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTC 107140 Query 60119 ACCACTATACTACCGAGGATT 60139 ||||||||||||||||||||| Sbjct 107141 ACCACTATACTACCGAGGATT 107161 >seq3929 Length=72668 Score = 113 bits (124), Expect = 5e-20 Identities = 77/86 (90%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 60057 AAAAAT--TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| || Sbjct 14592 AAAAATCATCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 14651 Query 60115 ACTCACCACTATACTACCGAGGATTG 60140 ||||||||||||||||||||||| || Sbjct 14652 ACTCACCACTATACTACCGAGGAATG 14677 >seq998 Length=2343502 Score = 113 bits (124), Expect = 5e-20 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||| ||||| |||||||||||| Sbjct 1204373 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACGGGCGGGGATACTCACCACT 1204314 Query 60125 ATACTACCGAGGATTGAATATA 60146 |||||||||||||||| |||| Sbjct 1204313 ATACTACCGAGGATTGCTTATA 1204292 Score = 111 bits (122), Expect = 2e-19 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1206362 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1206421 Query 60124 TATACTACCGAGGA 60137 |||||||||||||| Sbjct 1206422 TATACTACCGAGGA 1206435 Score = 111 bits (122), Expect = 2e-19 Identities = 75/83 (90%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1208009 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1208068 Query 60125 ATACTACCGAGG-ATTGAATATA 60146 |||||||||||| ||| ||||| Sbjct 1208069 ATACTACCGAGGAATTACATATA 1208091 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1192772 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1192831 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 1192832 ATACTACCGAGGA 1192844 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1210995 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1210936 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 1210935 ATACTACCGAGGA 1210923 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1214661 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1214602 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 1214601 ATACTACCGAGGA 1214589 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||| ||||| | ||||||||||||||||||| |||||||||||| Sbjct 1203874 TCTCCCCGGCGGGGAATCAAACCCCGTTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1203815 Query 60125 ATACTACCGAGGATTGAATATA 60146 |||||||||||||||| |||| Sbjct 1203814 ATACTACCGAGGATTGCTTATA 1203793 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| | || ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1210830 CTCCCCTGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1210771 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 1210770 TACTACCGAGGA 1210759 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||| ||| ||||||||| |||||||||| |||||||||| || Sbjct 1214496 CTCCCCGGCGGGGAATCGAGCCCCGGTCTCCCG--TGACAGGCGGGGATACTCACCATTA 1214439 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 1214438 TACTACCGAGGA 1214427 Score = 86.0 bits (94), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1205590 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTACCGAGGA 1205644 >seq322 Length=1176554 Score = 113 bits (124), Expect = 5e-20 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 797164 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 797223 Query 60125 ATACTACCGAGGATT 60139 ||||||||||||||| Sbjct 797224 ATACTACCGAGGATT 797238 >seq1736 Length=965595 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 494508 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 494449 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 494448 ATACTACCGAGGA 494436 >seq1339 Length=3011 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 168 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 227 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 228 ATACTACCGAGGA 240 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2503 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 2444 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 2443 ATACTACCGAGGA 2431 Score = 107 bits (118), Expect = 2e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||| ||||||||| |||||||||||| Sbjct 2852 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGYGACAGGCGGGGATACTCACCACT 2793 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 2792 ATACTACCGAGGA 2780 >seq3803 Length=782546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| || | || || | ||| | ||| ||| || || || ||||| || Sbjct 742750 TCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCT 742691 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||| || | || || || || || ||||| |||||||| | || ||||| | || Sbjct 742690 CAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGG 742631 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || || |||| | ||| | |||| ||| | || | | |||||||| | ||| | Sbjct 742630 GATGCCTTCTTTGT-CTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGA 742572 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | || |||||||| ||||| | ||||| || || || |||||| Sbjct 742571 CCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571786779031360