Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28]
4,312 sequences; 256,132,296 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1713 264 1e-65
seq3597 260 1e-64
>seq1713
Length=288524
Score = 264 bits (292), Expect = 1e-65
Identities = 584/867 (67%), Gaps = 27/867 (3%)
Strand=Plus/Minus
Query 15940 CATTTTT-TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAA 15998
||||||| ||||| || |||| || |||||||| || | |||||||| | |||||
Sbjct 285923 CATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAA 285864
Query 15999 TATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA----TTTATCGCATCCCAAT 16054
| ||||||||||| ||| || ||| || | ||| ||| | | ||||
Sbjct 285863 TGTTTTCCATAAATGTAAATGGGTTTCCTGTG---TGGTACACCTTTGTAAAA--CCAAG 285809
Query 16055 TCCAACAAT-AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCAT 16113
|||||| ||||| || | ||||||||| || || || ||| | | || ||||||
Sbjct 285808 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 285749
Query 16114 TCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC 16173
||| | | | | || | || || || | || | ||||| || ||||| |||||
Sbjct 285748 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTC 285689
Query 16174 AATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTA---ATAAGTGTTTA-AACA 16229
| || || || || || | | || | | ||||| |||||| | | ||||
Sbjct 285688 ACAAATAATCTCCCTAAC--CCGTGCTTCA--GTKGGTTTRTTGATAAGTTTAGAGAACA 285633
Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289
| | || ||||||||||| || | ||||| || || || |||| || || || ||
Sbjct 285632 TCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTG 285573
Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349
| | ||||| | || || || ||||||| ||| ||||| || ||||||| ||||||||
Sbjct 285572 TTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAA 285513
Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttttt-- 16407
|||| || || |||||||| |||||||| |||| || || || | | | | ||
Sbjct 285512 AGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYG 285453
Query 16408 actttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTAT 16467
|||| ||||| || ||| ||| || |||| ||||||| | | || ||
Sbjct 285452 ACTTA--ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAAT 285395
Query 16468 TGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527
||||||||||| | ||| ||||||| |||| || |||||||| || | | |||
Sbjct 285394 AGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACT 285335
Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587
|||||||| || || ||||||||||||| | ||||| |||||||| ||||| |||||
Sbjct 285334 GTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTC 285275
Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647
|| ||||||||| | | || ||||| | | ||||| || |||||||||||
Sbjct 285274 TTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCT 285215
Query 16648 AGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTT 16705
||||||||||| || || | | | | ||| ||| || | || | ||||| |
Sbjct 285214 GGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACT 285155
Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765
||||||| | |||||| || || || ||||| || ||||||| ||||| |
Sbjct 285154 --CCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 285097
Query 16766 GCCTTTTTATACATTTTCCATATGTCT 16792
|| || || || | | ||||| ||||
Sbjct 285096 GCTTTCTTGTAGAAATGCCATAAGTCT 285070
>seq3597
Length=814645
Score = 260 bits (288), Expect = 1e-64
Identities = 584/867 (67%), Gaps = 27/867 (3%)
Strand=Plus/Plus
Query 15940 CATTTTT-TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAA 15998
||||||| ||||| || |||| || |||||||| || | |||||||| | |||||
Sbjct 809998 CATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAA 810057
Query 15999 TATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA----TTTATCGCATCCCAAT 16054
| ||||||||||| ||| || ||| || | ||| ||| | | ||||
Sbjct 810058 TGTTTTCCATAAATGTAAATGGGTTTCCTGTG---TGGTACACCTTTGTAAAA--CCAAG 810112
Query 16055 TCCAACAAT-AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCAT 16113
|||||| ||||| || | ||||||||| || || || ||| | | || ||||||
Sbjct 810113 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 810172
Query 16114 TCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC 16173
||| | | | | || | || || || | || | ||||| || ||||| |||||
Sbjct 810173 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTC 810232
Query 16174 AATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTA---ATAAGTGTTTA-AACA 16229
| || || || || || | | || | | ||||| |||||| | | ||||
Sbjct 810233 ACAAATAATCTCCCTAAC--CCGTGCTTCA--GTKGGTTTRTTGATAAGTTTAGAGAACA 810288
Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289
| | || ||||||||||| || | ||||| || || || |||| || || || ||
Sbjct 810289 TCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTG 810348
Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349
| | ||||| | || || || ||||||| ||| ||||| || ||||| | ||||||||
Sbjct 810349 TTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAA 810408
Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttttt-- 16407
|||| || || |||||||| |||||||| |||| || || || | | | | ||
Sbjct 810409 AGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYG 810468
Query 16408 actttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTAT 16467
|||| ||||| || ||| ||| || |||| ||||||| | | | || ||
Sbjct 810469 ACTTA--ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAAT 810526
Query 16468 TGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527
||||||||||| | ||| ||||||| |||| || |||||||| || | | |||
Sbjct 810527 AGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACT 810586
Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587
|||||||| || || ||||||||||||| | ||||| |||||||| ||||| |||||
Sbjct 810587 GTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTC 810646
Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647
|| ||||||||| | | || ||||| | | ||||| || |||||||||||
Sbjct 810647 TTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCT 810706
Query 16648 AGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTT 16705
||||||||||| || || | | | | ||| ||| || | || | ||||| |
Sbjct 810707 GGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACT 810766
Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765
||||||| | |||||| || || || ||||| || ||||||| ||||| |
Sbjct 810767 --CCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 810824
Query 16766 GCCTTTTTATACATTTTCCATATGTCT 16792
|| || || || | | ||||| ||||
Sbjct 810825 GCTTTCTTGTAGAAATGCCATAAGTCT 810851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462487070603200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |