Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1713 264 1e-65 seq3597 260 1e-64 >seq1713 Length=288524 Score = 264 bits (292), Expect = 1e-65 Identities = 584/867 (67%), Gaps = 27/867 (3%) Strand=Plus/Minus Query 15940 CATTTTT-TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAA 15998 ||||||| ||||| || |||| || |||||||| || | |||||||| | ||||| Sbjct 285923 CATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAA 285864 Query 15999 TATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA----TTTATCGCATCCCAAT 16054 | ||||||||||| ||| || ||| || | ||| ||| | | |||| Sbjct 285863 TGTTTTCCATAAATGTAAATGGGTTTCCTGTG---TGGTACACCTTTGTAAAA--CCAAG 285809 Query 16055 TCCAACAAT-AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCAT 16113 |||||| ||||| || | ||||||||| || || || ||| | | || |||||| Sbjct 285808 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 285749 Query 16114 TCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC 16173 ||| | | | | || | || || || | || | ||||| || ||||| ||||| Sbjct 285748 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTC 285689 Query 16174 AATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTA---ATAAGTGTTTA-AACA 16229 | || || || || || | | || | | ||||| |||||| | | |||| Sbjct 285688 ACAAATAATCTCCCTAAC--CCGTGCTTCA--GTKGGTTTRTTGATAAGTTTAGAGAACA 285633 Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289 | | || ||||||||||| || | ||||| || || || |||| || || || || Sbjct 285632 TCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTG 285573 Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349 | | ||||| | || || || ||||||| ||| ||||| || ||||||| |||||||| Sbjct 285572 TTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAA 285513 Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttttt-- 16407 |||| || || |||||||| |||||||| |||| || || || | | | | || Sbjct 285512 AGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYG 285453 Query 16408 actttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTAT 16467 |||| ||||| || ||| ||| || |||| ||||||| | | || || Sbjct 285452 ACTTA--ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAAT 285395 Query 16468 TGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527 ||||||||||| | ||| ||||||| |||| || |||||||| || | | ||| Sbjct 285394 AGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACT 285335 Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587 |||||||| || || ||||||||||||| | ||||| |||||||| ||||| ||||| Sbjct 285334 GTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTC 285275 Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647 || ||||||||| | | || ||||| | | ||||| || ||||||||||| Sbjct 285274 TTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCT 285215 Query 16648 AGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTT 16705 ||||||||||| || || | | | | ||| ||| || | || | ||||| | Sbjct 285214 GGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACT 285155 Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765 ||||||| | |||||| || || || ||||| || ||||||| ||||| | Sbjct 285154 --CCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 285097 Query 16766 GCCTTTTTATACATTTTCCATATGTCT 16792 || || || || | | ||||| |||| Sbjct 285096 GCTTTCTTGTAGAAATGCCATAAGTCT 285070 >seq3597 Length=814645 Score = 260 bits (288), Expect = 1e-64 Identities = 584/867 (67%), Gaps = 27/867 (3%) Strand=Plus/Plus Query 15940 CATTTTT-TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAA 15998 ||||||| ||||| || |||| || |||||||| || | |||||||| | ||||| Sbjct 809998 CATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAA 810057 Query 15999 TATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA----TTTATCGCATCCCAAT 16054 | ||||||||||| ||| || ||| || | ||| ||| | | |||| Sbjct 810058 TGTTTTCCATAAATGTAAATGGGTTTCCTGTG---TGGTACACCTTTGTAAAA--CCAAG 810112 Query 16055 TCCAACAAT-AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCAT 16113 |||||| ||||| || | ||||||||| || || || ||| | | || |||||| Sbjct 810113 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 810172 Query 16114 TCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC 16173 ||| | | | | || | || || || | || | ||||| || ||||| ||||| Sbjct 810173 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTC 810232 Query 16174 AATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTA---ATAAGTGTTTA-AACA 16229 | || || || || || | | || | | ||||| |||||| | | |||| Sbjct 810233 ACAAATAATCTCCCTAAC--CCGTGCTTCA--GTKGGTTTRTTGATAAGTTTAGAGAACA 810288 Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289 | | || ||||||||||| || | ||||| || || || |||| || || || || Sbjct 810289 TCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTG 810348 Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349 | | ||||| | || || || ||||||| ||| ||||| || ||||| | |||||||| Sbjct 810349 TTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAA 810408 Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttttt-- 16407 |||| || || |||||||| |||||||| |||| || || || | | | | || Sbjct 810409 AGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYG 810468 Query 16408 actttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTAT 16467 |||| ||||| || ||| ||| || |||| ||||||| | | | || || Sbjct 810469 ACTTA--ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAAT 810526 Query 16468 TGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527 ||||||||||| | ||| ||||||| |||| || |||||||| || | | ||| Sbjct 810527 AGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACT 810586 Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587 |||||||| || || ||||||||||||| | ||||| |||||||| ||||| ||||| Sbjct 810587 GTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTC 810646 Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647 || ||||||||| | | || ||||| | | ||||| || ||||||||||| Sbjct 810647 TTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCT 810706 Query 16648 AGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTT 16705 ||||||||||| || || | | | | ||| ||| || | || | ||||| | Sbjct 810707 GGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACT 810766 Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765 ||||||| | |||||| || || || ||||| || ||||||| ||||| | Sbjct 810767 --CCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 810824 Query 16766 GCCTTTTTATACATTTTCCATATGTCT 16792 || || || || | | ||||| |||| Sbjct 810825 GCTTTCTTGTAGAAATGCCATAAGTCT 810851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462487070603200