Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1713 282 4e-71 seq3597 279 5e-70 seq628 86.0 6e-12 >seq1713 Length=288524 Score = 282 bits (312), Expect = 4e-71 Identities = 504/731 (69%), Gaps = 13/731 (2%) Strand=Plus/Minus Query 13908 CCATTTTT-TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13966 |||||||| ||||| || |||| || ||||||||||||| || ||||| ||||| Sbjct 285924 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 285865 Query 13967 ATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCT 14026 || ||||||||||| |||||| ||| || |||| || | |||| || | Sbjct 285864 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 285805 Query 14027 AATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCT 14086 | || ||||| || | | || ||||| |||||| ||| | | || ||||| || Sbjct 285804 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 285745 Query 14087 ATTAGTTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 14145 | || | ||| |||| || || | || || ||||| || ||||| || Sbjct 285744 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 285686 Query 14146 TATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTA---AAAATTAA 14202 ||||| | ||| | | | || || | || | | ||||| || || || Sbjct 285685 AATAATCTCCCTAACCCGTGCTTCAGTKGGT---TTRTTGATAAGTTTAGAGAACATCAA 285629 Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 || ||||||||||| ||||| || || ||||| || || ||||| || || |||||| Sbjct 285628 GCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTTAA 285569 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 |||||| | || || || ||||| ||||| |||||||| || |||| || |||||||| Sbjct 285568 TCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAGAA 285509 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382 || ||||||||||||||||| || | | || ||||||||| || || | || | Sbjct 285508 AATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTT 285449 Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 ||||| || ||| |||| ||| ||||| ||| | || | || ||||||||||| Sbjct 285448 AATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGCATT 285389 Query 14443 AAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14500 |||||| | | ||| |||| | | |||| ||||| |||||||| | | || ||| Sbjct 285388 AAATAACTTATTCTTTTCTTCCTTATCCTTG--ATGTAAGTATCAATCAAAAGACTGTAC 285331 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560 ||||| ||||| || || ||||| | | ||||| |||||||||||||| |||||| Sbjct 285330 ATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGT 285271 Query 14561 CATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620 |||||| ||| | | |||||||| | | |||||| || || ||||| || ||| Sbjct 285270 ACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCT 285211 Query 14621 GCAAAAAATGC 14631 |||||||| || Sbjct 285210 GCAAAAAAGGC 285200 >seq3597 Length=814645 Score = 279 bits (308), Expect = 5e-70 Identities = 504/731 (69%), Gaps = 13/731 (2%) Strand=Plus/Plus Query 13908 CCATTTTT-TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13966 |||||||| ||||| || |||| || ||||||||||||| || ||||| ||||| Sbjct 809997 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 810056 Query 13967 ATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCT 14026 || ||||||||||| |||||| ||| || |||| || | |||| || | Sbjct 810057 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 810116 Query 14027 AATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCT 14086 | || ||||| || | | || ||||| |||||| ||| | | || ||||| || Sbjct 810117 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 810176 Query 14087 ATTAGTTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 14145 | || | ||| |||| || || | || || ||||| || ||||| || Sbjct 810177 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 810235 Query 14146 TATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTA---AAAATTAA 14202 ||||| | ||| | | | || || | || | | ||||| || || || Sbjct 810236 AATAATCTCCCTAACCCGTGCTTCAGTKGGT---TTRTTGATAAGTTTAGAGAACATCAA 810292 Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 || ||||||||||| ||||| || |||||||| || || ||||| || || |||||| Sbjct 810293 GCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTTAA 810352 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 |||||| | || || || ||||| ||||| |||||||| || || | || |||||||| Sbjct 810353 TCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAGAA 810412 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382 || ||||||||||||||||| || | | || ||||||||| || || | || | Sbjct 810413 AATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTT 810472 Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 ||||| || ||| |||| ||| ||||| ||| | || | || ||||||||||| Sbjct 810473 AATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGCATT 810532 Query 14443 AAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14500 |||||| | | ||| |||| | | |||| ||||| |||||||| | | || ||| Sbjct 810533 AAATAACTTATTCTTTTCTTCCTTATCCTTG--ATGTAAGTATCAATCAAAAGACTGTAC 810590 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560 ||||| ||||| || || ||||| | | ||||| |||||||||||||| |||||| Sbjct 810591 ATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGT 810650 Query 14561 CATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620 |||||| ||| | | |||||||| | | |||||| || || ||||| || ||| Sbjct 810651 ACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCT 810710 Query 14621 GCAAAAAATGC 14631 |||||||| || Sbjct 810711 GCAAAAAAGGC 810721 >seq628 Length=1115932 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 13889 TCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTA 13948 |||||||| || || || | || |||||||| | |||| ||||||||||||||| Sbjct 723454 TCTTTGTTGCCCATWACTCCACTCTTCTGATATTCGCCTACTCGTTTTTCAAAGAAGTTG 723513 Query 13949 GTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTG 13994 || || ||||| || || || || ||||| |||||||| ||||||| Sbjct 723514 GTCTTTCCTTCAAGAGAGATGTTCTCCATGAAATCAAAAGGATTTG 723559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482319601572160