Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1713 96.9 7e-15 >seq1713 Length=288524 Score = 96.9 bits (106), Expect = 7e-15 Identities = 295/455 (65%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 101901 ATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCAT 101960 |||||| | || ||| || || |||||||||||||| || || |||||| |||||||| Sbjct 285466 ATTTGGAGAAAG-AATGGTWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCAT 285524 Query 101961 TCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATG 102020 | ||| | || |||||| | || || | || | || || || | || ||| |||| Sbjct 285525 TTGCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATG 285584 Query 102021 AGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGG 102080 | | || || || ||||||||||| | || ||||||||| || |||| || Sbjct 285585 AACTAATCAGCAGAGAYGAAGGTCTTCACTGTGATTTTGCATGCTTGATGTTCTCTAA-- 285642 Query 102081 GTTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAA 102140 || | | | || | || | || || || ||| | |||||| || | Sbjct 285643 -ACTTATCAAYAAACCMACTGAAGCACGGGTTAGGGAGATTATTTGTGAAGCTGTTAACA 285701 Query 102141 TTGAACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAG 102199 ||||| ||| | |||| || | | |||| || | | | | ||||||||| | || Sbjct 285702 TTGAA-AAGGAGTTCTGGACTGATGCCCTTCCATGTCATCTCCTTGGAATGAACAGTAAC 285760 Query 102200 TTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA 102259 | ||| | || ||||||||||||||| | || | | | | |||| | || | | Sbjct 285761 CTTATGGGTCAATACATTGAATTTGTGTCTGACAGATTGCTTGTTGCCCTTGGTTTTACA 285820 Query 102260 AAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAG 102319 ||| || | ||||| || |||| ||||| || ||||| || || ||| Sbjct 285821 AAGGTGTACCACACAGGAAACCCATTTACATTTATGGAAAACATTTCACTTGAAGGAAAG 285880 Query 102320 ACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCA 102354 | ||||| ||||| || |||| || |||||||| Sbjct 285881 GCTAACTTCTTTGAGAARCGAGTAGCAGAGTATCA 285915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989529327957960