Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1713 313 3e-80 seq3597 307 1e-78 seq25 149 8e-31 seq628 93.3 5e-14 >seq1713 Length=288524 Score = 313 bits (346), Expect = 3e-80 Identities = 626/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Minus Query 33269 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 33328 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 33329 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttt 33388 |||||||| | ||| || |||||||| || ||| || || | ||| | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 33389 tttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCAT 33448 | |||| || | || || |||||| || | || ||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 33449 TTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 33507 | || |||||||| | ||| | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 33508 TGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAAT 33567 || || || | ||||| ||||| | ||||| | ||| | | |||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRT-TGATAA-- 285645 Query 33568 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATT 33624 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 33625 CGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33684 | ||||| || | ||| || | || ||||||||||||| ||| ||||| | || | Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 33685 ATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC 33744 ||| || |||||||| || || || ||||||||||| || | | ||| |||||| | Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAAT- 285466 Query 33745 CGGCGCTGTCATGTA-----TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 | || ||| | | ||||||| || ||| | ||||| || | |||||||| Sbjct 285465 -GAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 285407 Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 285406 GAAKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 285347 Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 285346 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 285287 Query 33920 ACATCTAGCCTCG-GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCA 33978 |||||| || || ||| | || |||||| || |||| ||| | | |||||| | Sbjct 285286 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 285228 Query 33979 CTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 34038 | |||||||| |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 285227 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 285169 Query 34039 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 34097 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 285168 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 285109 Query 34098 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 34157 | || || ||| || || || | || ||| | ||| ||| || ||||| || | Sbjct 285108 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 285049 Query 34158 ACAAATCTATTTGGATT 34174 ||||| |||| |||||| Sbjct 285048 ACAAACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 307 bits (340), Expect = 1e-78 Identities = 625/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Plus Query 33269 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 33328 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 33329 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttt 33388 |||||||| | ||| || |||||||| || ||| || || | ||| | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 33389 tttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCAT 33448 | |||| || | || || |||||| || | || ||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 33449 TTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 33507 | || |||||||| | ||| | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 33508 TGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAAT 33567 || || || | ||||| ||||| | ||||| | ||| | | |||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRT-TGATAA-- 810276 Query 33568 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATT 33624 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 33625 CGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33684 | ||||| || | ||| || | || ||||||||||||| ||| ||||| | || | Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 33685 ATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC 33744 | | || |||||||| || || || ||||||||||| || | | ||| |||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAAT- 810455 Query 33745 CGGCGCTGTCATGTA-----TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 | || ||| | | ||||||| || ||| | ||||| || | |||||||| Sbjct 810456 -GAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 810514 Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 810515 GAAGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 810574 Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 810575 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 810634 Query 33920 ACATCTAGCCTC-GGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCA 33978 |||||| || || ||| | || |||||| || |||| ||| | | |||||| | Sbjct 810635 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 810693 Query 33979 CTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 34038 | |||||||| |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 810694 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 810752 Query 34039 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 34097 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 810753 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 810812 Query 34098 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 34157 | || || ||| || || || | || ||| | ||| ||| || ||||| || | Sbjct 810813 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 810872 Query 34158 ACAAATCTATTTGGATT 34174 ||||| |||| |||||| Sbjct 810873 ACAAACCTATGTGGATT 810889 >seq25 Length=601041 Score = 149 bits (164), Expect = 8e-31 Identities = 243/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||||| |||||||| ||| ||| || || ||||| || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 ||||| | ||| ||| || | || |||||||||||||| ||||| ||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 63627 TTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGA 63686 | | | |||||||||||||| || | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 63687 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63746 || || || || |||||||| ||||| | |||||||| |||||||| || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 63747 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATT 63806 || ||| || || || ||||| | ||| | ||| ||||| || | |||| ||| | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856 ||| || || || | || ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 62675 TAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCT 62734 ||||||| | || |||| |||||||||||| || ||| |||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 62735 ATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGAT 62794 ||||| | ||| | | |||||||| || || || | ||||| ||||||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 62795 AGGTCTATGTCTCTTATTAGA 62815 ||||| || ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 >seq628 Length=1115932 Score = 93.3 bits (102), Expect = 5e-14 Identities = 165/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 33660 TTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCA 33719 || || ||||| || || | ||| || || || |||||||| |||||||| || |||||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 33720 AAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAA 33776 ||||||| | ||| || || | | || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 33777 TCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt-tttC 33835 | || ||||| |||| || | |||| || ||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 33836 ATT--ACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33892 || ||| |||| ||| | || ||||||||||| ||||| || || || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469 ||||||||| || || || || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 |||| || | ||| |||| || || ||||||||||| || |||| | | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | | || ||||| || || |||| || |||| | ||||||||||||| || Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGCAAA 724001 Query 33590 ATCGCAGTGCAGACCCT 33606 || || || || |||| Sbjct 724002 GTCACAATGGAGTCCCT 724018 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||||| | || || ||||| || || |||||||| || || || || |||||||| Sbjct 723465 CATWACTCCACTCTTCTGATATTCGCCTACTCGTTTTTCAAAGAAGTTGGTCTTTCCTTC 723524 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAA 33384 | || || || |||||||||||||| ||||| | |||||||||| Sbjct 723525 AAGAGAGATGTTCTCCATGAAATCAAAAGGATTTGCGACATTGTAAA 723571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629783652831360