Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1713 315 9e-81 seq3597 307 1e-78 seq25 145 1e-29 seq628 98.7 1e-15 >seq1713 Length=288524 Score = 315 bits (348), Expect = 9e-81 Identities = 623/914 (68%), Gaps = 14/914 (2%) Strand=Plus/Minus Query 35845 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 35904 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 35905 TTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttt 35964 || ||||| | ||| || |||||||| || ||||| || | || | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 35965 tttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT 36024 | |||| || | || || |||||| || | |||||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 36025 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 36083 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 36084 TAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAAT 36143 | || || || ||||| | || | ||||| | ||| | | ||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 285645 Query 36144 GTTTA---AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATT 36200 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 36201 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 36260 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 36261 ATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC 36320 ||| |||||||||||||| || || ||||| ||||| || | | ||| |||||| | Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATG 285465 Query 36321 CGGCA--CTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 36377 ||| || | || ||||||| || ||| | ||||| || | |||||||| | Sbjct 285464 AAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 285405 Query 36378 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 36437 || || ||||||||||| | | || ||||| | |||| || | || ||||||| Sbjct 285404 AKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 285345 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 |||||||||| |||||||| || || || || || || | || |||||| || || |||| Sbjct 285344 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 285285 Query 36498 ATCTAGCCTCG-GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 |||| || || ||| | ||||||||| || |||| ||| | | |||||| || Sbjct 285284 ATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACA 285226 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 ||||| || |||||||||||||| || | || | | | ||| ||| || | Sbjct 285225 ATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCC 285166 Query 36617 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 || | || |||| ||||||||||||||| || || |||||||| |||||||||| Sbjct 285165 GTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATG 285106 Query 36677 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || || ||| || || || | || ||| | ||| ||| ||||||||||| | ||| Sbjct 285105 GAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACA 285046 Query 36737 AATCTATTTTGATT 36750 || |||| | |||| Sbjct 285045 AACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 307 bits (340), Expect = 1e-78 Identities = 622/914 (68%), Gaps = 14/914 (2%) Strand=Plus/Plus Query 35845 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 35904 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 35905 TTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttt 35964 || ||||| | ||| || |||||||| || ||||| || | || | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 35965 tttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT 36024 | |||| || | || || |||||| || | |||||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 36025 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 36083 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 36084 TAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAAT 36143 | || || || ||||| | || | ||||| | ||| | | ||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 810276 Query 36144 GTTTA---AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATT 36200 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 36201 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 36260 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 36261 ATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC 36320 | | |||||||||||||| || || ||||| ||||| || | | ||| |||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATG 810456 Query 36321 CGGCA--CTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 36377 ||| || | || ||||||| || ||| | ||||| || | |||||||| | Sbjct 810457 AAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 810516 Query 36378 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 36437 || || ||||||||||| | | || ||||| | |||| || | || ||||||| Sbjct 810517 AGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 810576 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 |||||||||| |||||||| || || || || || || | || |||||| || || |||| Sbjct 810577 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 810636 Query 36498 ATCTAGCCTC-GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 |||| || || ||| | ||||||||| || |||| ||| | | |||||| || Sbjct 810637 ATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACA 810695 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 ||||| || |||||||||||||| || | || | | | ||| ||| || | Sbjct 810696 ATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCC 810755 Query 36617 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 || | || |||| ||||||||||||||| || || |||||||| |||||||||| Sbjct 810756 GTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATG 810815 Query 36677 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || || ||| || || || | || ||| | ||| ||| ||||||||||| | ||| Sbjct 810816 GAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACA 810875 Query 36737 AATCTATTTTGATT 36750 || |||| | |||| Sbjct 810876 AACCTATGTGGATT 810889 >seq25 Length=601041 Score = 145 bits (160), Expect = 1e-29 Identities = 242/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 66300 ATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 66359 || ||||| |||||||||||||| ||| ||| || || ||||| || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 66360 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 66419 ||||| | ||| ||| || | || ||||||||||| || || || ||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 66420 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 66479 | | | |||||||||||||| || | | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 66480 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 66539 || || || || |||||||| ||||| | |||||||| |||||||| || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 66540 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 66599 || ||| || || || ||||| | ||| | ||| ||||| || | |||| | | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 66600 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 ||| || || || | || ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 105 bits (116), Expect = 9e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| ||| ||||||| ||||||||||||| |||||||| | |||||||| |||| | Sbjct 246100 CACTGAATTGTTTTTTGGTTTCTTTGTGTAAGTTTGATACTTCAATTCTAGCTGCTAACA 246041 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||| || ||||| | |||||| | ||||| ||||| || || |||||||||| Sbjct 246040 ATGCATAGTCAGGATGCTTTGTAGTCATGGATGCTGCAATTTCTGCAGCAAGAGTGTCCA 245981 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 66966 ||| || | ||||| ||||| || || | ||| | || |||| Sbjct 245980 GTTCAGTTGTCTTGACTCCTTTATAGATACCCTTTATAGCTTTAATAG 245933 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 65468 TAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT 65527 ||||||| | || |||| |||||| ||||| || ||| |||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 65528 ATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 65587 ||||| | ||| | | |||||||| || || || | ||||| ||||||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 65588 AGGTCTATGTCTCTTATTAGA 65608 ||||| || ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 >seq628 Length=1115932 Score = 98.7 bits (108), Expect = 1e-15 Identities = 166/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 36236 TTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCA 36295 || || ||||| || || | ||||| || || ||||||||||||||||| || || ||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 36296 AAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCA---TGTATCCACTTTTGAGCCCAA 36352 ||||||| | ||| || || | | || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 36353 TCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttt-tttC 36411 | || ||||| |||| || | ||| | |||||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 36412 ATT--ACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 36468 || ||| |||| ||| | || ||||||||||| ||||| || || || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 96.9 bits (106), Expect = 5e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045 ||||||||| || ||||| || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 |||| || | ||| |||| || || |||||||||||| || || ||| | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 36106 AGATATTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCG 36163 | | |||||||| || || || ||| || |||| | ||||||||||||| Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTAC--TAGGTGTTCATACATCAAACATGCA 723999 Query 36164 AAATCGCAGTGTAGACCCT 36182 || || || || || |||| Sbjct 724000 AAGTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658137324486080