Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3803 105 7e-18 >seq3803 Length=782546 Score = 105 bits (116), Expect = 7e-18 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || |||||||| || ||||| || ||||||| || | ||||| || ||| Sbjct 742725 TGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCAAGTTGT 742666 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || ||||| | || || | ||| || || || || |||||||||||||| ||| | || Sbjct 742665 TTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTTGTC-TTGAATCTT 742607 Query 139682 TGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 |||||| | | || | |||||| | || || ||||||| ||| | || || || || Sbjct 742606 TGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAATGGTTTTTCCCGT 742547 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| || || ||||| || ||||| Sbjct 742546 CAAAGTCTTGACGAAAATCTGCAT 742523 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | || || | ||||| |||||||| || || ||||| || |||||| Sbjct 742521 CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 742462 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| |||||||| || || |||| ||||| || || || || || Sbjct 742461 AAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGG 742402 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| |||| || || | | ||| | || ||| | || || || Sbjct 742401 ATGCCTTCTTTGTC-CTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGAC 742343 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || || || || || || || ||||| Sbjct 742342 TTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496037262150400