Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28]
4,312 sequences; 256,132,296 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3803 105 7e-18
>seq3803
Length=782546
Score = 105 bits (116), Expect = 7e-18
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || |||||||| || ||||| || ||||||| || | ||||| || |||
Sbjct 742725 TGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCAAGTTGT 742666
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| ||||| | || || | ||| || || || || |||||||||||||| ||| | ||
Sbjct 742665 TTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTTGTC-TTGAATCTT 742607
Query 139682 TGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|||||| | | || | |||||| | || || ||||||| ||| | || || || ||
Sbjct 742606 TGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAATGGTTTTTCCCGT 742547
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
||| || || ||||| || |||||
Sbjct 742546 CAAAGTCTTGACGAAAATCTGCAT 742523
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | || || | ||||| |||||||| || || ||||| || ||||||
Sbjct 742521 CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 742462
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| |||||||| || || |||| ||||| || || || || ||
Sbjct 742461 AAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGG 742402
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||||||||| ||| |||| || || | | ||| | || ||| | || || ||
Sbjct 742401 ATGCCTTCTTTGTC-CTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGAC 742343
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || || || || || || || || |||||
Sbjct 742342 TTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496037262150400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |