Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1713 327 2e-84 seq3597 322 7e-83 seq25 154 2e-32 seq628 102 1e-16 >seq1713 Length=288524 Score = 327 bits (362), Expect = 2e-84 Identities = 627/916 (68%), Gaps = 18/916 (2%) Strand=Plus/Minus Query 49647 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 49706 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 49707 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 49766 |||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 49767 tttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCAT 49826 | |||| || | || || |||||| || | |||||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 49827 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAA 49885 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 49886 TGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAAT 49945 || || || || ||||| ||||| | ||||| | ||| | | ||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 285645 Query 49946 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTT 50002 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 50003 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 50062 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 50063 ATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC 50122 ||| ||||||||||| || || || ||||| ||||| || || | ||| ||||| || Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCC--AAA 285467 Query 50123 TGGCGCTGTC-----ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 || || ||| | |||||||| || ||| | ||||| || | |||||||| Sbjct 285466 TGAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 285407 Query 50178 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 50237 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 285406 GAAKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 285347 Query 50238 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 50297 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 285346 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 285287 Query 50298 ACATCTAGCCTC-GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCA 50356 |||||| || || ||| | || |||||| || |||| |||| | | |||||| | Sbjct 285286 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 285228 Query 50357 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGG 50416 | ||||| || |||||||||||||| || | || | | | ||| ||| || || Sbjct 285227 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGT 285168 Query 50417 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 50476 || | || |||| ||||||||||||||| || || |||||||| |||||||||| Sbjct 285167 CCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAA 285108 Query 50477 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 50536 || || ||| || || || | || ||| | ||| ||| || ||||| || | | Sbjct 285107 TGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATA 285048 Query 50537 CAAATCTATTTGGATT 50552 |||| |||| |||||| Sbjct 285047 CAAACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 322 bits (356), Expect = 7e-83 Identities = 626/916 (68%), Gaps = 18/916 (2%) Strand=Plus/Plus Query 49647 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 49706 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 49707 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 49766 |||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 49767 tttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCAT 49826 | |||| || | || || |||||| || | |||||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 49827 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAA 49885 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 49886 TGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAAT 49945 || || || || ||||| ||||| | ||||| | ||| | | ||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 810276 Query 49946 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTT 50002 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 50003 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 50062 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 50063 ATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC 50122 | | ||||||||||| || || || ||||| ||||| || || | ||| ||||| || Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCC--AAA 810454 Query 50123 TGGCGCTGTC-----ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 || || ||| | |||||||| || ||| | ||||| || | |||||||| Sbjct 810455 TGAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 810514 Query 50178 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 50237 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 810515 GAAGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 810574 Query 50238 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 50297 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 810575 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 810634 Query 50298 ACATCTAGCCTC-GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCA 50356 |||||| || || ||| | || |||||| || |||| |||| | | |||||| | Sbjct 810635 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 810693 Query 50357 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGG 50416 | ||||| || |||||||||||||| || | || | | | ||| ||| || || Sbjct 810694 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGT 810753 Query 50417 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 50476 || | || |||| ||||||||||||||| || || |||||||| |||||||||| Sbjct 810754 CCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAA 810813 Query 50477 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 50536 || || ||| || || || | || ||| | ||| ||| || ||||| || | | Sbjct 810814 TGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATA 810873 Query 50537 CAAATCTATTTGGATT 50552 |||| |||| |||||| Sbjct 810874 CAAACCTATGTGGATT 810889 >seq25 Length=601041 Score = 154 bits (170), Expect = 2e-32 Identities = 244/350 (70%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 80179 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 80238 || ||||| ||||| |||||||| ||| ||| || || ||||| || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 80239 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 ||||| | ||| ||| || | || ||||||||||| || ||||| |||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 80299 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 80358 | | | |||||||||||||| || | | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 80359 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 80418 || || || || |||||||| ||||| | |||||||| |||||||| || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 80419 TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 80478 || ||| || || || ||||| | ||| | ||| ||||| || | |||| | | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 80479 TTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAA 80528 ||| ||| || || | || ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 79347 TAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCT 79406 |||||| | || |||| |||||| || || || ||||||||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 79407 ATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 79466 ||||| | ||| | | |||||||| || || || | ||||| ||||||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 79467 AGGTCTATGTCTCTTATTAGA 79487 ||||| || ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| ||||| |||||||||| ||||| | || ||| || || ||||| || ||||| | Sbjct 253294 TACCTGAAACTCTCCAGACAGAACTCTTCTAGAGTAGATGTTGCTGGTGTAAGGTTCAAT 253235 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||||||||| || | |||||| || ||||| || |||||||| || || | | | Sbjct 253234 GGATTCATTATTACCAAGAATTTGTGCTGTTGAAGCAGTTGGCATTGGAGCAAGAAGAAG 253175 Query 79179 ACTATTTCTAAGACCGT 79195 || || |||||||||| Sbjct 253174 GCTGTTCCTAAGACCGT 253158 >seq628 Length=1115932 Score = 102 bits (112), Expect = 1e-16 Identities = 167/239 (70%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 50038 TTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCA 50097 || || ||||| || || | ||||| ||||| |||||||| |||||||| || || ||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 50098 AAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA---TGTATCCACTTTTGAGCCCAA 50154 |||||||| | ||| || || | || || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 50155 TCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt-tttC 50213 | || ||||| |||| || | |||| || ||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 50214 ATT--ACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270 || ||| |||| ||| | || ||||||||||| ||||| || || || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847 ||||||||| || ||||| || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 |||| || | ||| |||| || || ||||||||||| || |||||| | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 | | || ||||| || || || | || |||| | ||||||||||||| || Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGCAAA 724001 Query 49968 ATCGCAGTGCAGACCCT 49984 || || || || |||| Sbjct 724002 GTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718230085311680