Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1713 264 1e-65 seq3597 260 1e-64 seq628 84.2 2e-11 >seq1713 Length=288524 Score = 264 bits (292), Expect = 1e-65 Identities = 504/734 (69%), Gaps = 19/734 (3%) Strand=Plus/Minus Query 13364 CCATTTTT-TGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422 |||||||| ||||| || |||| || ||||| ||||||| || ||||| ||||| Sbjct 285924 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 285865 Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCT 13482 || ||||||||||| ||||| ||| || |||| || | |||| || | Sbjct 285864 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 285805 Query 13483 AATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCT 13542 | | ||||| |||| | ||| ||||| |||||| ||| | | || ||||| || Sbjct 285804 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 285745 Query 13543 ATTAGTTTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 13601 | || | ||| |||| || ||| | || || ||||| || ||||| || Sbjct 285744 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 285686 Query 13602 TATAATAATCTTAATAAT--GTCATTAGAAGGAGGATATTTTAGATGTTTA---AAAATT 13656 |||||||| ||| || || || || | || | | ||||| || || Sbjct 285685 ---AATAATCTCCCTAACCCGTGCTTC--AGTKGGTTTRTTGATAAGTTTAGAGAACATC 285631 Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || || ||||||||||| ||||| || || ||||| || || ||||| || || |||| Sbjct 285630 AAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTT 285571 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 |||||||| | || || || ||||| ||||| |||||||| || |||| || |||||| Sbjct 285570 AATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAG 285511 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGC-TTTTTTGTT 13835 || || ||||||||||||||||| || | | || ||||||||| || || | || | Sbjct 285510 AAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGAC 285451 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 | | ||||| || ||| |||| ||| ||||| ||| | || | || || || || Sbjct 285450 TTA-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGC 285392 Query 13896 ATTGAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 ||| ||||| | | ||| |||| | | |||| ||||| |||||||| | | || Sbjct 285391 ATTAAATAACTTATTCTTTTCTTCCTTATCCTTG--ATGTAAGTATCAATCAAAAGACTG 285334 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 |||||||| ||||| || || || || | | ||||| |||||||||||||| |||||| Sbjct 285333 TACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCT 285274 Query 14014 GACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 |||||| || | | |||||||| | | ||||| ||||| ||||| || Sbjct 285273 TGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTG 285214 Query 14074 GCTGCAAAAAATGC 14087 ||||||||||| || Sbjct 285213 GCTGCAAAAAAGGC 285200 >seq3597 Length=814645 Score = 260 bits (288), Expect = 1e-64 Identities = 504/734 (69%), Gaps = 19/734 (3%) Strand=Plus/Plus Query 13364 CCATTTTT-TGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422 |||||||| ||||| || |||| || ||||| ||||||| || ||||| ||||| Sbjct 809997 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 810056 Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCT 13482 || ||||||||||| ||||| ||| || |||| || | |||| || | Sbjct 810057 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 810116 Query 13483 AATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCT 13542 | | ||||| |||| | ||| ||||| |||||| ||| | | || ||||| || Sbjct 810117 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 810176 Query 13543 ATTAGTTTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 13601 | || | ||| |||| || ||| | || || ||||| || ||||| || Sbjct 810177 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 810235 Query 13602 TATAATAATCTTAATAAT--GTCATTAGAAGGAGGATATTTTAGATGTTTA---AAAATT 13656 |||||||| ||| || || || || | || | | ||||| || || Sbjct 810236 ---AATAATCTCCCTAACCCGTGCTTC--AGTKGGTTTRTTGATAAGTTTAGAGAACATC 810290 Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || || ||||||||||| ||||| || |||||||| || || ||||| || || |||| Sbjct 810291 AAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTT 810350 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 |||||||| | || || || ||||| ||||| |||||||| || || | || |||||| Sbjct 810351 AATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAG 810410 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGC-TTTTTTGTT 13835 || || ||||||||||||||||| || | | || ||||||||| || || | || | Sbjct 810411 AAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGAC 810470 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 | | ||||| || ||| |||| ||| ||||| ||| | || | || || || || Sbjct 810471 TTA-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGC 810529 Query 13896 ATTGAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 ||| ||||| | | ||| |||| | | |||| ||||| |||||||| | | || Sbjct 810530 ATTAAATAACTTATTCTTTTCTTCCTTATCCTTG--ATGTAAGTATCAATCAAAAGACTG 810587 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 |||||||| ||||| || || || || | | ||||| |||||||||||||| |||||| Sbjct 810588 TACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCT 810647 Query 14014 GACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 |||||| || | | |||||||| | | ||||| ||||| ||||| || Sbjct 810648 TGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTG 810707 Query 14074 GCTGCAAAAAATGC 14087 ||||||||||| || Sbjct 810708 GCTGCAAAAAAGGC 810721 >seq628 Length=1115932 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 13485 TAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13544 ||| ||||||||||||| ||||||||| ||||| ||| ||||||| ||||| || || Sbjct 723819 TAACAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAAT 723878 Query 13545 TAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTAT 13604 | ||| ||| | || ||||| || |||| ||| ||| ||||| || || || Sbjct 723879 CAATTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGAT 723938 Query 13605 AATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 13664 ||| || | | || | || || | | ||| |||| | | || ||||| || Sbjct 723939 AATCTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGC 723998 Query 13665 AAAATCACAATGAAGGCCCT 13684 ||| |||||||| || |||| Sbjct 723999 AAAGTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478563004063680