Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1713 307 1e-78 seq3597 306 5e-78 seq25 145 1e-29 seq628 93.3 6e-14 >seq1713 Length=288524 Score = 307 bits (340), Expect = 1e-78 Identities = 622/915 (68%), Gaps = 16/915 (2%) Strand=Plus/Minus Query 41752 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 41811 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 41812 CTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 41871 ||||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 41872 tttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCAT 41931 | |||| || | || || |||||| || | | ||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 41932 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 41990 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 41991 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 42050 | || || || ||||| || || | ||||| | ||| | | ||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 285645 Query 42051 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATT 42107 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || |||| || Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 42108 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAA 42167 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 42168 ATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC 42227 ||| ||||||||||| || || || ||||| ||||| || | | ||| |||||| | Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATG 285465 Query 42228 CGGCA--CTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 42284 ||| || | || ||||||| || ||| | ||||| || | |||||||| | Sbjct 285464 AAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 285405 Query 42285 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGA 42344 || || || |||||||| | | || ||||| | |||| || | || ||||| | Sbjct 285404 AKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 285345 Query 42345 TCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 42404 |||||||||| |||||||| || || || || || || | || ||||| || || |||| Sbjct 285344 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 285285 Query 42405 ATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTA 42464 |||| || || || ||||||||| || |||| |||| | | |||||| || | Sbjct 285284 ATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAA 285225 Query 42465 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGT- 42523 |||| || |||||||||||||| || | || ||| | |||| |||| | || Sbjct 285224 TTCCATCGCTGGCTGCAAAAAAGGCTA--GCACTTTTGACAAAAACCCTTTCTCACTGTC 285167 Query 42524 -GTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAA 42582 || || || |||| ||||||||||||||| || || |||||||| || ||||||| Sbjct 285166 CGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAAT 285107 Query 42583 TGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAAC 42642 || ||| ||| || || || | || ||| | || ||| |||||||| || | || Sbjct 285106 GGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATAC 285047 Query 42643 AAATCTATTTGGATT 42657 ||| |||| |||||| Sbjct 285046 AAACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 306 bits (338), Expect = 5e-78 Identities = 622/915 (68%), Gaps = 16/915 (2%) Strand=Plus/Plus Query 41752 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 41811 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 41812 CTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 41871 ||||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 41872 tttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCAT 41931 | |||| || | || || |||||| || | | ||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 41932 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 41990 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 41991 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 42050 | || || || ||||| || || | ||||| | ||| | | ||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 810276 Query 42051 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATT 42107 ||||| |||||||| ||||| ||||| ||||| ||||| |||||||| || |||| || Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 42108 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAA 42167 | || || || | ||| || | || ||||||||||||| ||| ||||| | |||| Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 42168 ATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC 42227 | | ||||||||||| || || || ||||| ||||| || | | ||| |||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATG 810456 Query 42228 CGGCA--CTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 42284 ||| || | || ||||||| || ||| | ||||| || | |||||||| | Sbjct 810457 AAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 810516 Query 42285 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGA 42344 || || || |||||||| | | || ||||| | |||| || | || ||||| | Sbjct 810517 AGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 810576 Query 42345 TCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 42404 |||||||||| |||||||| || || || || || || | || ||||| || || |||| Sbjct 810577 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 810636 Query 42405 ATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTA 42464 |||| || || || ||||||||| || |||| |||| | | |||||| || | Sbjct 810637 ATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAA 810696 Query 42465 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGT- 42523 |||| || |||||||||||||| || | || ||| | |||| |||| | || Sbjct 810697 TTCCATCGCTGGCTGCAAAAAAGGCTA--GCACTTTTGACAAAAACCCTTTCTCACTGTC 810754 Query 42524 -GTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAA 42582 || || || |||| ||||||||||||||| || || |||||||| || ||||||| Sbjct 810755 CGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAAT 810814 Query 42583 TGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAAC 42642 || ||| ||| || || || | || ||| | || ||| |||||||| || | || Sbjct 810815 GGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATAC 810874 Query 42643 AAATCTATTTGGATT 42657 ||| |||| |||||| Sbjct 810875 AAACCTATGTGGATT 810889 >seq25 Length=601041 Score = 145 bits (160), Expect = 1e-29 Identities = 242/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || ||||| ||||| |||||||| || ||| || || ||||| || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381 ||||| | ||| ||| || | || ||||||||||| || || || ||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441 | | | |||||||||||||| || | | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 72501 || || || || |||||||| ||||| | |||||||| |||||||| || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 72502 TCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 || ||| || || || ||||| | ||| | ||||||||| || | |||| | | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 ||| ||| || || | || ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 71430 TAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCT 71489 |||||| |||| |||| |||||| || || || |||||||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 71490 ATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGAT 71549 ||||| | ||| | | |||||||| || || || | ||||| || |||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 71550 AGGTCTGTGTCTCTTATTAGA 71570 |||||||| ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 >seq628 Length=1115932 Score = 93.3 bits (102), Expect = 6e-14 Identities = 165/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 42143 TTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCA 42202 || || ||||| || || | ||||| || || |||||||| |||||||| || || ||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 42203 AAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCA---TGTATCCACTTTTGAGCCCAA 42259 ||||||| | ||| || || | | || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 42260 TCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt-tttC 42318 | || ||||| |||| || | |||| || ||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 42319 ATT--ACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTT 42375 || ||| |||| ||| | || ||||||||||| ||||| ||||| || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| | || || ||||| || || |||||||| || || || ||||||||||| Sbjct 723465 CATWACTCCACTCTTCTGATATTCGCCTACTCGTTTTTCAAAGAAGTTGGTCTTTCCTTC 723524 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAA 41867 | || || || |||||||||||||| ||||| | ||||| |||| Sbjct 723525 AAGAGAGATGTTCTCCATGAAATCAAAAGGATTTGCGACATTGTAAA 723571 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 41952 ||||||||| || | || || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 |||| || | ||| |||| || || |||||||||||| || || ||| | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 42013 AGATCTTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCG 42070 | | |||||||| || || || ||| || |||| | ||||||||||||| Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTAC--TAGGTGTTCATACATCAAACATGCA 723999 Query 42071 AAATCGCAGTGCAGACCCT 42089 || || || || || |||| Sbjct 724000 AAGTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671103025597120