Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3597 114 2e-20 seq1713 113 7e-20 >seq3597 Length=814645 Score = 114 bits (126), Expect = 2e-20 Identities = 377/578 (65%), Gaps = 9/578 (2%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| || | ||| ||| | ||| | | ||||| || || | || ||| ||||| Sbjct 810868 TTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAGAAAGCACTAGCTTCCATTTGG 810809 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || |||||||| || || || || || | | || ||| ||| ||||| || Sbjct 810808 ACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGACTGGAGTACT---TTGACGGAC 810752 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 | |||| || |||| | || | | | ||||| ||||| | | ||||||||| || Sbjct 810751 AGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTTGCAGCCAGCGATGGAATTGTA 810692 Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA-GAGGTGTCGTGCT 125235 || ||||| ||||| | |||||| ||||| | || | | || || | || | Sbjct 810691 GGAGAAAATCTTGTTGAAA-GATTCTGCCAAGAAGT-ACAAGTACAAGAAGCAAGATGTT 810634 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 |||| || || ||| | | || ||||| | ||||| ||||||||| | |||||| Sbjct 810633 TTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAATGTACAGTCTTTTGATTG 810574 Query 125296 ACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC 125355 | | ||||| ||| | || || | | | | ||||| || || || || | | Sbjct 810573 ATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTAATGCTATTGATACCTTCC 810514 Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTTCG 125414 | | | | ||||||||||| |||| ||| |||||| | | | | | | |||| Sbjct 810513 CTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT-TAAGTCRAAGACTGCTTCA 810455 Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474 | | || ||| |||| ||||| || || || ||||| || |||||||| ||| |||| Sbjct 810454 TTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCTTTT 810395 Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534 || || || || ||| | || ||||| || | | || ||| | || ||| ||| || Sbjct 810394 GCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAA 810335 Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | || |||| || || || |||||||| ||||| Sbjct 810334 CTAATCAGCAGAGATGAAGGTCTTCACTGTGATTTTGC 810297 >seq1713 Length=288524 Score = 113 bits (124), Expect = 7e-20 Identities = 376/578 (65%), Gaps = 9/578 (2%) Strand=Plus/Plus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| || | ||| ||| | ||| | | ||||| || || | || ||| ||||| Sbjct 285053 TTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAGAAAGCACTAGCTTCCATTTGG 285112 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || |||||||| || || || || || | | || ||| ||| ||||| || Sbjct 285113 ACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGACTGGAGTACT---TTGACGGAC 285169 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 | |||| || |||| | || | | | ||||| ||||| | | ||||||||| || Sbjct 285170 AGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTTGCAGCCAGCGATGGAATTGTA 285229 Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA-GAGGTGTCGTGCT 125235 || ||||| ||||| | |||||| ||||| | || | | || || | || | Sbjct 285230 GGAGAAAATCTTGTTGAAA-GATTCTGCCAAGAAGT-ACAAGTACAAGAAGCAAGATGTT 285287 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 |||| || || ||| | | || ||||| | ||||| ||||||||| | |||||| Sbjct 285288 TTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAATGTACAGTCTTTTGATTG 285347 Query 125296 ACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC 125355 | | ||||| ||| | || || | | | | ||||| || || || || | | Sbjct 285348 ATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTAATGCTATTGATACMTTCC 285407 Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTTCG 125414 | | | | ||||||||||| |||| ||| |||||| | | | | | | |||| Sbjct 285408 CTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT-TAAGTCRAAGACTGCTTCA 285466 Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474 | | || ||| |||| ||||| || || || ||||| || |||||||| ||| ||| Sbjct 285467 TTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCATTT 285526 Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534 || || || || ||| | || ||||| || | | || ||| | || ||| ||| || Sbjct 285527 GCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAA 285586 Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | || |||| || || || |||||||| ||||| Sbjct 285587 CTAATCAGCAGAGAYGAAGGTCTTCACTGTGATTTTGC 285624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741019256909120