Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28]
4,312 sequences; 256,132,296 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3597 114 2e-20
seq1713 113 7e-20
>seq3597
Length=814645
Score = 114 bits (126), Expect = 2e-20
Identities = 377/578 (65%), Gaps = 9/578 (2%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||| || | ||| ||| | ||| | | ||||| || || | || ||| |||||
Sbjct 810868 TTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAGAAAGCACTAGCTTCCATTTGG 810809
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| |||||||| || || || || || | | || ||| ||| ||||| ||
Sbjct 810808 ACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGACTGGAGTACT---TTGACGGAC 810752
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
| |||| || |||| | || | | | ||||| ||||| | | ||||||||| ||
Sbjct 810751 AGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTTGCAGCCAGCGATGGAATTGTA 810692
Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA-GAGGTGTCGTGCT 125235
|| ||||| ||||| | |||||| ||||| | || | | || || | || |
Sbjct 810691 GGAGAAAATCTTGTTGAAA-GATTCTGCCAAGAAGT-ACAAGTACAAGAAGCAAGATGTT 810634
Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295
|||| || || ||| | | || ||||| | ||||| ||||||||| | ||||||
Sbjct 810633 TTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAATGTACAGTCTTTTGATTG 810574
Query 125296 ACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC 125355
| | ||||| ||| | || || | | | | ||||| || || || || | |
Sbjct 810573 ATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTAATGCTATTGATACCTTCC 810514
Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTTCG 125414
| | | | ||||||||||| |||| ||| |||||| | | | | | | ||||
Sbjct 810513 CTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT-TAAGTCRAAGACTGCTTCA 810455
Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474
| | || ||| |||| ||||| || || || ||||| || |||||||| ||| ||||
Sbjct 810454 TTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCTTTT 810395
Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534
|| || || || ||| | || ||||| || | | || ||| | || ||| ||| ||
Sbjct 810394 GCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAA 810335
Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
| || |||| || || || |||||||| |||||
Sbjct 810334 CTAATCAGCAGAGATGAAGGTCTTCACTGTGATTTTGC 810297
>seq1713
Length=288524
Score = 113 bits (124), Expect = 7e-20
Identities = 376/578 (65%), Gaps = 9/578 (2%)
Strand=Plus/Plus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||| || | ||| ||| | ||| | | ||||| || || | || ||| |||||
Sbjct 285053 TTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAGAAAGCACTAGCTTCCATTTGG 285112
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| |||||||| || || || || || | | || ||| ||| ||||| ||
Sbjct 285113 ACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGACTGGAGTACT---TTGACGGAC 285169
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
| |||| || |||| | || | | | ||||| ||||| | | ||||||||| ||
Sbjct 285170 AGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTTGCAGCCAGCGATGGAATTGTA 285229
Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA-GAGGTGTCGTGCT 125235
|| ||||| ||||| | |||||| ||||| | || | | || || | || |
Sbjct 285230 GGAGAAAATCTTGTTGAAA-GATTCTGCCAAGAAGT-ACAAGTACAAGAAGCAAGATGTT 285287
Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295
|||| || || ||| | | || ||||| | ||||| ||||||||| | ||||||
Sbjct 285288 TTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAATGTACAGTCTTTTGATTG 285347
Query 125296 ACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC 125355
| | ||||| ||| | || || | | | | ||||| || || || || | |
Sbjct 285348 ATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTAATGCTATTGATACMTTCC 285407
Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTTCG 125414
| | | | ||||||||||| |||| ||| |||||| | | | | | | ||||
Sbjct 285408 CTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT-TAAGTCRAAGACTGCTTCA 285466
Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474
| | || ||| |||| ||||| || || || ||||| || |||||||| ||| |||
Sbjct 285467 TTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCATTT 285526
Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534
|| || || || ||| | || ||||| || | | || ||| | || ||| ||| ||
Sbjct 285527 GCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAA 285586
Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
| || |||| || || || |||||||| |||||
Sbjct 285587 CTAATCAGCAGAGAYGAAGGTCTTCACTGTGATTTTGC 285624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741019256909120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |