Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3803 141 7e-29 >seq3803 Length=782546 Score = 141 bits (156), Expect = 7e-29 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||| | || | |||||| ||||| ||||| || |||||||| ||||| Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | | ||||| | |||||| ||||| |||| | | ||||||||| || Sbjct 742689 AAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGG 742630 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || | || ||| | || ||||| ||||| ||| || Sbjct 742629 ATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACC 742570 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | |||||||||||| || |||| ||| || || ||||| ||||| Sbjct 742569 TCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| || | || | ||||| || || || || || |||||||| ||||| Sbjct 742521 CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 742462 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | | ||||| | ||||| || ||| | || | ||| |||||||| || Sbjct 742461 AAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGG 742402 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| |||||| |||| ||| |||| || |||||||| ||| || Sbjct 742401 ATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGACT 742342 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || || || || | ||| || ||||| || ||||| Sbjct 742341 TCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362160166577592