Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq3803 102 6e-17 >seq3803 Length=782546 Score = 102 bits (112), Expect = 6e-17 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||||||||| | || | ||| || ||| |||||| || || || || ||| | Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || ||| |||| || | ||||||||| || ||||| | | ||| ||||| | || Sbjct 742689 AAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGG 742630 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||||| ||| ||| ||| ||| || | ||| || || || || || Sbjct 742629 ATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACC 742570 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| ||||| || || |||||||| || || || ||||| Sbjct 742569 TCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||||||| || | || | || || || ||| || || || || || ||| | Sbjct 742521 CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 742462 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || ||| |||| || | |||||||| || || || | || || ||||| | || Sbjct 742461 AAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGG 742402 Query 44015 ACACCTTCTTTATC-TGAAATTTTTTGT-TTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | |||||||| || |||| |||| || || || | ||| |||||| || || | Sbjct 742401 ATGCCTTCTTTGTCCTGAA--TTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGA 742344 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCG 44125 | || | || || || || || ||||||||||||||||| || |||||| || Sbjct 742343 CTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCATGACG 742291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354758955550176