Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq3803 122 7e-23 >seq3803 Length=782546 Score = 122 bits (134), Expect = 7e-23 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| || |||| || | ||| || || || ||||| || |||||||| |||| Sbjct 742751 TTCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGC 742692 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| |||||| | |||||| || || | || || || ||||| || || Sbjct 742691 TCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGG 742632 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||||||| ||| ||| |||||| | ||| | |||| ||||| Sbjct 742631 GGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGA 742572 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || | |||||||||||| || ||||| || ||||| ||||| |||||| Sbjct 742571 CCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| ||||||| || | || || ||||| || || || |||||||| |||| Sbjct 742523 TTCCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 742464 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACG 20098 || ||| |||||| | ||||| || || | || || | |||||| || | || Sbjct 742463 TCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCG 742404 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||||||| |||||| ||||| | ||| || ||||| ||||| Sbjct 742403 GG-ATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCG 742345 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || || || || || || || || ||||| || ||||| Sbjct 742344 ACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419565149643672