Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq3597 219 4e-52 seq1713 215 4e-51 seq628 114 1e-20 >seq3597 Length=814645 Score = 219 bits (242), Expect = 4e-52 Identities = 499/742 (67%), Gaps = 12/742 (2%) Strand=Plus/Plus Query 12846 ACATAACAGACATTTTT-TGATATTC-GCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCC 12903 |||| ||| ||||||| ||||| || |||| ||| || ||||| ||||| | ||||| Sbjct 809989 ACATGACAC-CATTTTTCTGATACTCTGCTA-CTCGYTTCTCAAAGAAGTTAGCCTTTCC 810046 Query 12904 TTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACA 12963 ||| | ||||| ||||||||||| || || ||| | || ||| || | Sbjct 810047 TTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAA 810106 Query 12964 CCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACA 13023 || | | | | ||||||||||| ||||| || ||||| || ||| | | || Sbjct 810107 ACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACT 810166 Query 13024 GTTCATTCCTATTAATTTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAA 13082 ||||||||| | | | ||| || | || || || | || | ||||| || | || Sbjct 810167 GTTCATTCCAAGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAA 810225 Query 13083 CTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTA- 13141 | ||||| || || || || | ||| || | | | |||||| | ||| Sbjct 810226 CAGCTTCACAAATAATCTCCCTAACC-CGTGCTTCAGTKGGTTTRTTGATAAGT--TTAG 810282 Query 13142 --AACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 ||||||| ||||||||||||||||| | ||||||||||| || ||||| || || | Sbjct 810283 AGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAG 810342 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259 | ||||| || || | | ||| || ||||||| ||| ||||| || ||||| | || Sbjct 810343 AGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCAC 810402 Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319 | ||||| || || || |||||||| ||||| || | || ||||| ||| | | | | Sbjct 810403 CAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAG 810462 Query 13320 TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTT 13379 | || || |||||||| | | ||| || |||| |||| || | | | Sbjct 810463 TCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTAT 810522 Query 13380 CTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATA 13439 | || || |||||||| | ||| ||||| | | || || |||||||| ||||| | Sbjct 810523 CAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAA 810582 Query 13440 AGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAG 13499 || |||||||| || || ||||| ||||| | | ||| || |||||||||||||| | Sbjct 810583 GACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTG 810642 Query 13500 CCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGT 13559 | ||| ||| || ||||| | | |||||||| | | ||||| || || || | Sbjct 810643 CTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCAT 810702 Query 13560 CACTAGCAGCaaaaaaaGCAAG 13581 | || || |||||||| || || Sbjct 810703 CGCTGGCTGCAAAAAAGGCTAG 810724 >seq1713 Length=288524 Score = 215 bits (238), Expect = 4e-51 Identities = 498/742 (67%), Gaps = 12/742 (2%) Strand=Plus/Minus Query 12846 ACATAACAGACATTTTT-TGATATTC-GCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCC 12903 |||| ||| ||||||| ||||| || |||| ||| || ||||| ||||| | ||||| Sbjct 285932 ACATGACAC-CATTTTTCTGATACTCTGCTA-CTCGYTTCTCAAAGAAGTTAGCCTTTCC 285875 Query 12904 TTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACA 12963 ||| | ||||| ||||||||||| || || ||| | || ||| || | Sbjct 285874 TTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAA 285815 Query 12964 CCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACA 13023 || | | | | ||||||||||| ||||| || ||||| || ||| | | || Sbjct 285814 ACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACT 285755 Query 13024 GTTCATTCCTATTAATTTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAA 13082 ||||||||| | | | ||| || | || || || | || | ||||| || | || Sbjct 285754 GTTCATTCCAAGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAA 285696 Query 13083 CTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTA- 13141 | ||||| || || || || | ||| || | | | |||||| | ||| Sbjct 285695 CAGCTTCACAAATAATCTCCCTAACC-CGTGCTTCAGTKGGTTTRTTGATAAGT--TTAG 285639 Query 13142 --AACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 ||||||| ||||||||||||||||| | ||||| ||||| || ||||| || || | Sbjct 285638 AGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAG 285579 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259 | ||||| || || | | ||| || ||||||| ||| ||||| || ||||| | || Sbjct 285578 AGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCAC 285519 Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319 | ||||| || || || |||||||| ||||| || | || ||||| ||| | | | | Sbjct 285518 CAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAG 285459 Query 13320 TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTT 13379 | || || |||||||| | | ||| || |||| |||| || | | | Sbjct 285458 TCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTAT 285399 Query 13380 CTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATA 13439 | || || |||||||| | ||| ||||| | | || || |||||||| ||||| | Sbjct 285398 CAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAA 285339 Query 13440 AGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAG 13499 || |||||||| || || ||||| ||||| | | ||| || |||||||||||||| | Sbjct 285338 GACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTG 285279 Query 13500 CCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGT 13559 | ||| ||| || ||||| | | |||||||| | | ||||| || || || | Sbjct 285278 CTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCAT 285219 Query 13560 CACTAGCAGCaaaaaaaGCAAG 13581 | || || |||||||| || || Sbjct 285218 CGCTGGCTGCAAAAAAGGCTAG 285197 >seq628 Length=1115932 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 ||||||||| |||||||||||||| ||||| |||||||| ||||||| ||||||||| || Sbjct 723819 TAACAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAAT 723878 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 ||||| ||| | ||| || |||| || | || ||| ||| |||| || || | | Sbjct 723879 CAATTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGAT 723938 Query 13096 TATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGC 13155 || | | | | | | |||| |||| | | ||| || | | |||||| |||||| Sbjct 723939 AATCTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGC 723998 Query 13156 AAAATCACAGTGCAATCC 13173 ||| ||||| || | ||| Sbjct 723999 AAAGTCACAATGGAGTCC 724016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430959750797424