Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3597 268 2e-66 seq1713 262 9e-65 seq3803 168 2e-36 seq4114 107 4e-18 seq628 105 2e-17 seq1363 104 5e-17 seq2006 87.8 4e-12 >seq3597 Length=814645 Score = 268 bits (296), Expect = 2e-66 Identities = 613/909 (67%), Gaps = 16/909 (2%) Strand=Plus/Minus Query 268691 AACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAA 268750 || ||| |||| ||||| |||||||||| |||||| || ||||| | ||||| Sbjct 810889 AATCCACATAGGTTTGTATTATTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAG 810830 Query 268751 CAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGAT 268810 | || | ||||| ||||||| || |||||||| || || | | || | | || Sbjct 810829 AAAGCACTAGCTTCCATTTGGACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGAC 810770 Query 268811 TGGAAAAATTTAAAAC-CAGA-AGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTG 268868 |||| | ||| | ||| |||||| | ||| | || | | || || ||||||| Sbjct 810769 TGGAGTACTTTGACGGACAGTGAGAAAG--GGTTTTTGTCAAAAGTGCTAGCCTTTTTTG 810712 Query 268869 CAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGA 268928 ||| || ||||| || || |||||||| || || | ||||| ||||| ||||| Sbjct 810711 CAGCCAGCGATGGAATTGTAGGAGAAAATCTTGTTGAAAGATTCTGCCAAGAAGTACAAG 810652 Query 268929 TTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGA 268988 | | ||||| ||||||||||| || || || | | || || ||||| || || || | Sbjct 810651 TACAAGAAGCAAGATGTTTTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAA 810592 Query 268989 TGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTT 269048 |||||||||| || || |||||||| || | ||||| | |||||||| | ||||| Sbjct 810591 TGTACAGTCTTTTGATTGATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTA 810532 Query 269049 CTTCTA-TGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107 | ||| ||| | || | ||||| || ||||| ||| |||| || | || ||||| Sbjct 810531 ATGCTATTGATACCT-TCCCTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGATT 810473 Query 269108 AA--CG-ATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164 || | | | || | | |||||||| | || || ||||| || || || || || Sbjct 810472 AAGTCRAAGACTGCTTCATTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATT 810413 Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224 |||||||| || ||||||| || || || ||||| || || | || | | |||||| Sbjct 810412 TTCTTTTCTGGTGCTTTTGCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGA 810353 Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 ||||| |||||| ||| | || ||||| || |||||| | ||||| || || || || Sbjct 810352 TTAACACACTCTAATGAACTAATCAGCAGAGATGAAGGTCTTCACTGTGATTTTGCATGC 810293 Query 269285 TTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATA 269344 || | || |||| | | ||| | ||||| || ||| | || || ||||| Sbjct 810292 TTGATGTTCTCTAA--ACTTATCA-AYAAACCMACTGAAGCACGGGTTAGGGAGATTATT 810236 Query 269345 GATTCAGCTGTTTCTGTAGAAACAGAATTTCT-AACGGAAGCTCTATCTAT-CGATCTTA 269402 | ||||||| | |||| || | |||| || || || || || || |||| Sbjct 810235 TGTGAAGCTGTTAACATTGAAA-AGGAGTTCTGGACTGATGCCCT-TCCATGTCATCTCC 810178 Query 269403 TCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGG 269462 | || ||||| || || ||| |||| ||| | || || ||||| |||||||| | Sbjct 810177 TTGGAATGAACAGTAACCTTATGGGTCAATACATTGAATTTGTGTCTGACAGATTGCTTG 810118 Query 269463 TGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATA 269522 | | | || |||| || || || | ||| || |||| |||||||| || | Sbjct 810117 TTGCCCTTGGTTTTACAAAGGTGTACCACACAGGAAACCCATTTACATTTATGGAAAACA 810058 Query 269523 TATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGG 269582 | ||| | ||||| |||||||| ||||| ||||| || ||| | |||||||||| | Sbjct 810057 TTTCACTTGAAGGAAAGGCTAACTTCTTTGAGAARCGAGTAGCAGAGTATCAGAAAAATG 809998 Query 269583 GTGTAATGT 269591 |||| |||| Sbjct 809997 GTGTCATGT 809989 >seq1713 Length=288524 Score = 262 bits (290), Expect = 9e-65 Identities = 611/909 (67%), Gaps = 16/909 (2%) Strand=Plus/Plus Query 268691 AACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAA 268750 || ||| |||| ||||| |||||||||| |||||| || ||||| | ||||| Sbjct 285032 AATCCACATAGGTTTGTATTATTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAG 285091 Query 268751 CAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGAT 268810 | || | ||||| ||||||| || |||||||| || || | | || | | || Sbjct 285092 AAAGCACTAGCTTCCATTTGGACAGTCGAAGAAGTTGACCTAAGTAAAGATATCAATGAC 285151 Query 268811 TGGAAAAATTTAAAAC-CAGA-AGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTG 268868 |||| | ||| | ||| |||||| | ||| | || | | || || ||||||| Sbjct 285152 TGGAGTACTTTGACGGACAGTGAGAAAG--GGTTTTTGTCAAAAGTGCTAGCCTTTTTTG 285209 Query 268869 CAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGA 268928 ||| || ||||| || || |||||||| || || | ||||| ||||| ||||| Sbjct 285210 CAGCCAGCGATGGAATTGTAGGAGAAAATCTTGTTGAAAGATTCTGCCAAGAAGTACAAG 285269 Query 268929 TTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGA 268988 | | ||||| ||||||||||| || || || | | || || ||||| || || || | Sbjct 285270 TACAAGAAGCAAGATGTTTTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGAAA 285329 Query 268989 TGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTT 269048 |||||||||| || || |||||||| || | ||||| | |||||||| | ||||| Sbjct 285330 TGTACAGTCTTTTGATTGATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATTTA 285389 Query 269049 CTTCTA-TGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107 | ||| ||| | | | ||||| || ||||| ||| |||| || | || ||||| Sbjct 285390 ATGCTATTGATACMT-TCCCTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGATT 285448 Query 269108 AA--CG-ATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164 || | | | || | | |||||||| | || || ||||| || || || || || Sbjct 285449 AAGTCRAAGACTGCTTCATTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGATT 285508 Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224 |||||||| || | ||||| || || || ||||| || || | || | | |||||| Sbjct 285509 TTCTTTTCTGGTGCATTTGCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGGA 285568 Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 ||||| |||||| ||| | || ||||| || |||||| | ||||| || || || || Sbjct 285569 TTAACACACTCTAATGAACTAATCAGCAGAGAYGAAGGTCTTCACTGTGATTTTGCATGC 285628 Query 269285 TTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATA 269344 || | || |||| | | ||| | ||||| || ||| | || || ||||| Sbjct 285629 TTGATGTTCTCTAA--ACTTATCA-AYAAACCMACTGAAGCACGGGTTAGGGAGATTATT 285685 Query 269345 GATTCAGCTGTTTCTGTAGAAACAGAATTTCT-AACGGAAGCTCTATCTAT-CGATCTTA 269402 | ||||||| | |||| || | |||| || || || || || || |||| Sbjct 285686 TGTGAAGCTGTTAACATTGAAA-AGGAGTTCTGGACTGATGCCCT-TCCATGTCATCTCC 285743 Query 269403 TCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGG 269462 | || ||||| || || ||| |||| ||| | || || ||||| |||||||| | Sbjct 285744 TTGGAATGAACAGTAACCTTATGGGTCAATACATTGAATTTGTGTCTGACAGATTGCTTG 285803 Query 269463 TGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATA 269522 | | | || |||| || || || | ||| || |||| |||||||| || | Sbjct 285804 TTGCCCTTGGTTTTACAAAGGTGTACCACACAGGAAACCCATTTACATTTATGGAAAACA 285863 Query 269523 TATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGG 269582 | ||| | ||||| |||||||| ||||| ||||| || ||| | |||||||||| | Sbjct 285864 TTTCACTTGAAGGAAAGGCTAACTTCTTTGAGAARCGAGTAGCAGAGTATCAGAAAAATG 285923 Query 269583 GTGTAATGT 269591 |||| |||| Sbjct 285924 GTGTCATGT 285932 >seq3803 Length=782546 Score = 168 bits (186), Expect = 2e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || ||||| ||||| | || || |||||||| || || ||||| Sbjct 742752 ATTCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCG 742693 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||| | || ||||| |||||||||||||| || || || || ||||| ||||| Sbjct 742692 CTCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGG 742633 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || |||||||||| ||| ||||| || | ||| ||||| ||||| Sbjct 742632 GGGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCG 742573 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || ||||| || || || || | || || || || ||||||||| Sbjct 742572 ACCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 >seq4114 Length=678496 Score = 107 bits (118), Expect = 4e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || || || ||||||| || |||||||||||||| ||||| ||| Sbjct 195454 CCMCCTCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTC 195513 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || |||| || ||||| |||||||||||||||||||| || | |||||| || || || Sbjct 195514 AGTGTTCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGG 195573 Query 104453 ATTCCT 104458 || ||| Sbjct 195574 ATACCT 195579 Score = 105 bits (116), Expect = 2e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 104336 CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGA 104395 ||||| || || || || ||||||| || |||||||||||||| ||||| ||| || Sbjct 197704 CCTCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGT 197763 Query 104396 GTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATT 104455 |||| || ||||| |||||||||||||||||||| || | |||||| || || || || Sbjct 197764 GTTCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATA 197823 Query 104456 CCT 104458 ||| Sbjct 197824 CCT 197826 >seq628 Length=1115932 Score = 105 bits (116), Expect = 2e-17 Identities = 174/245 (71%), Gaps = 15/245 (6%) Strand=Plus/Minus Query 268973 AATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAA 269032 ||||| || ||||||||||||||||| || ||||| | | | ||| ||| ||| Sbjct 724610 AATATCCAYTCAGAGATGTACAGTCTTTTGATAGAAGCCC---TCGTTGAAGACAGTGAA 724554 Query 269033 AAGAA--AAGACTATTTTC--TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088 ||||| || ||| | ||| | |||| ||| | | || | || ||| || | Sbjct 724553 AAGAARCAAAACT-TGTTCAATGCTATCCAAACACTTCCCGCAGTAATGAAGAAAGCTCA 724495 Query 269089 ATGGGCTCTGAAATGGATAAAC---GATAGCGC--GCCTTACGGAGAAAGGTTAGTTGCT 269143 |||||||| ||||||| ||| || || || || || | || | || | ||||| Sbjct 724494 TTGGGCTCTTGAATGGATCAACCCTGAAAGGGCAAGCTTTGCTGAAAGAG--TGGTTGCC 724437 Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203 ||||| ||||| ||||| || |||||||| ||||||||||| || ||||| ||| ||||| Sbjct 724436 TTTGCTGCTGTTGAAGGAATTTTCTTTTCYGGGTCTTTTGCTGCAATCTTCTGGCTGAAG 724377 Query 269204 AAAAG 269208 ||||| Sbjct 724376 AAAAG 724372 >seq1363 Length=349685 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || |||| | ||| ||||||||| ||||||||||| ||||| |||| || || | Sbjct 271539 GACTCTTCTTCAATGTTATAGTCACTGAGAGTTCTACCATCTTCAAGTTTCTTCCCTGTG 271598 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 ||||| || ||| ||||| || || || |||||| | || |||||||||| || | | Sbjct 271599 AAAATAAGAAGCTGCTGATCTGGTGGGATGCCTTCTCTGTCTTGAATCTTTGACTTAATA 271658 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 | ||| | || | ||| |||| || || || || || |||| || || | || || Sbjct 271659 TCTTCAATTGTGTTGCTGAGTTCAACGTCAAGGGTGATGATCTTTCCTGTCATGGTCTTA 271718 Query 104546 ACAAATATCTGCATT 104560 ||||| ||||||||| Sbjct 271719 ACAAAGATCTGCATT 271733 >seq2006 Length=936319 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 ||||| || ||||||||||| | || ||||| || | ||||||||||| ||||| || Sbjct 303780 CCTTCCTTGTCCTGAATCTTGGTCTTGACATTCTCAATAGTATCGCTAGGCTCTACTTCA 303721 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || |||||||| || | ||||| || || |||||||| ||| Sbjct 303720 AGGGTGATGGTCTTACCCGTTAYGGTTTTAACGAAGATCTGCATGTTG 303673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151334788116896