Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3803 143 2e-29 >seq3803 Length=782546 Score = 143 bits (158), Expect = 2e-29 Identities = 178/241 (74%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||||||||| | || || | ||| | |||||| ||||| || | | Sbjct 742533 AAAATCTGCATTCCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATG 742474 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || ||||||| ||| | ||| || |||||||||||| | ||||| | | || Sbjct 742473 TTGTAGTCGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGT 742414 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| || || ||||||||||| | |||||| | ||| || | | ||| || Sbjct 742413 TGGTCTGGCGGGATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATC- 742355 Query 94949 GCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||| ||||| || | ||||| || |||||||| | ||| ||||||||||||||||| Sbjct 742354 GCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Query 95008 G 95008 | Sbjct 742294 G 742294 Score = 113 bits (124), Expect = 4e-20 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||||||||||| || || | || | ||| || || || || | ||| || || Sbjct 742753 CATTCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 742694 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 ||||| ||| | ||| || || |||||||| | || || | ||||| || || || Sbjct 742693 GCTCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGG 742634 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-T 94955 || || ||||||||||| | ||| |||| || || | | ||||| || ||| | Sbjct 742633 GGGGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTC-GCTTGGTT 742575 Query 94956 CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||| || ||||||||||| || | ||| || || || |||||||| Sbjct 742574 CGACCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448267037104320