Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq1092 111 3e-20 seq1152 98.7 2e-16 seq4033 96.9 7e-16 seq1628 95.1 2e-15 seq4056 93.3 8e-15 seq1767 86.0 1e-12 seq552 86.0 1e-12 seq223 86.0 1e-12 seq14 86.0 1e-12 seq941 82.4 1e-11 seq2008 80.6 5e-11 >seq1092 Length=1761890 Score = 111 bits (122), Expect = 3e-20 Identities = 113/145 (78%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 3366 AGATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATC 3425 ||| ||||||| |||||||| || || || ||||| || |||| ||||| ||||| || Sbjct 415869 AGACAAAGTTTTAGATCATTGCCATTTAACTGGTAAATATAGAGGAGCTGCTCATAATTC 415810 Query 3426 CTGTAACGTTAATTATCAAAAATCT-ACCATTATCCCAGTTGTCTTTCATAATTTATCCG 3484 ||||| | |||||||||| | ||||| || ||||| || |||||||||||||| | Sbjct 415809 TTGTAATCTAAATTATCAAATTCCGGACCAT-ATTCCAGTCGTGTTTCATAATTTATCTG 415751 Query 3485 GCTATGATTCCCACTTCATAATTAA 3509 ||||||||| ||| || | ||||| Sbjct 415750 GCTATGATTGCCATTTATTTATTAA 415726 Score = 87.8 bits (96), Expect = 4e-13 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 4620 AGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAA 4679 |||||| ||||| || |||| | | || | |||||||||||||||| |||| |||||||| Sbjct 414612 AGCTAAAAATGAATTTGAAAGAGAATTCTTTAAATTAATGAATAATTCGGTCTTTGGAAA 414553 Query 4680 GACGATGGAGAATGTACGAAA 4700 |||||| |||||||| |||| Sbjct 414552 GACGATTGAGAATGTTAGAAA 414532 >seq1152 Length=5019 Score = 98.7 bits (108), Expect = 2e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 3366 AGATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATC 3425 ||||||||||| ||||| || ||||| || ||||| || ||| |||||| ||||| || Sbjct 3321 AGATAAAGTTTTAGATCACTGCCACTTAACCGGTAAATATCGAGGTGCTGCTCATAATTC 3262 Query 3426 CTGTAACGTTAATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGG 3485 || || | |||||||||| | | | ||| || ||||| ||||||||||| | || Sbjct 3261 TTGCAATCTAAATTATCAAATTCCAAACCATATTCCGGTTGTATTTCATAATTTGGCTGG 3202 Query 3486 CTATGATTCCCACTTCATAATTAA 3509 ||||||| ||| || | ||||| Sbjct 3201 ATATGATTGCCATTTATTTATTAA 3178 Score = 87.8 bits (96), Expect = 4e-13 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 4568 AATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGA 4627 |||| | ||| | ||||||||| | ||| ||||||| | || | | || | Sbjct 1305 AATCTAATTGGATGAAATCATATGTGGATTTTAATACCGAGAGAAGAGCGCAGTCCAAAA 1246 Query 4628 ATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGG 4687 |||| ||||||||| | || | |||||||||||||||| | || |||||||||||||| | Sbjct 1245 ATGAATTCGAAAAAGAATTCTTTAAATTAATGAATAATTCTGTATTTGGAAAGACGATTG 1186 Query 4688 AGAATGTACGAAA 4700 ||||||| |||| Sbjct 1185 AGAATGTTAGAAA 1173 >seq4033 Length=43728 Score = 96.9 bits (106), Expect = 7e-16 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 3367 GATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCC 3426 ||||| |||| ||||| || ||| |||| ||||| || ||| || ||||| || || Sbjct 22884 GATAAGGTTTTAGATCACTGCCACATTACAGGTAAATATCGAGGAGCAGCACACAATTCT 22943 Query 3427 TGTAACGTTAATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGGC 3486 |||||| | |||||||| | | | | ||| |||||||| |||||||||||| | || Sbjct 22944 TGTAACTTAAATTATCAGATTCCAAACCATATTCCAGTTGTATTTCATAATTTAGCGGGA 23003 Query 3487 TATGATTCCCACTTCATAATTAA 3509 ||||||| ||| || | ||||| Sbjct 23004 TATGATTGCCATTTATTCATTAA 23026 >seq1628 Length=2211 Score = 95.1 bits (104), Expect = 2e-15 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 3367 GATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCC 3426 ||||||||| ||||||||| || || ||||| || || | | ||||| ||||| || Sbjct 611 GATAAAGTTCTTGATCATTGCCATTTAACGGGCAAATATCGTGGGGCTGCTCATAATTCT 670 Query 3427 TGTAACGTTAATTATCAAAAATCT-ACCATTATCCCAGTTGTCTTTCATAATTTATCCGG 3485 ||||| | |||||||||| | ||||| || ||||| || |||||||||||| | || Sbjct 671 TGTAATTTAAATTATCAAATTCCAGACCAT-ATTCCAGTCGTATTTCATAATTTAGCAGG 729 Query 3486 CTATGATTCCCACTTCATAATTAA 3509 ||||||| ||| || | ||||| Sbjct 730 ATATGATTGCCATTTATTTATTAA 753 Score = 82.4 bits (90), Expect = 1e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 4621 GCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAG 4680 ||||| ||||| || |||| | | || | |||||||||||||||| | || ||||||||| Sbjct 1868 GCTAAAAATGAATTTGAAAGAGAATTCTTTAAATTAATGAATAATTCTGTATTTGGAAAG 1927 Query 4681 ACGATGGAGAATGTACGAAA 4700 ||||| |||||||| |||| Sbjct 1928 ACGATTGAGAATGTTAGAAA 1947 >seq4056 Length=40663 Score = 93.3 bits (102), Expect = 8e-15 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 3366 AGATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATC 3425 ||||||||||| ||||| ||||| || || || || || ||| ||||| ||||| || Sbjct 38559 AGATAAAGTTTTAGATCACTGTCATTTAACAGGGAAATATCGAGGGGCTGCTCATAATTC 38618 Query 3426 CTGTAACGTTAATTATCAAAAATC-TACCATTATCCCAGTTGTCTTTCATAATTTATCCG 3484 ||||| | |||||||||| | |||| ||| ||||| || |||||| ||||| | | Sbjct 38619 GTGTAATCTAAATTATCAAATTCCAGACCA-TATTCCAGTGGTGTTTCATTATTTAGCTG 38677 Query 3485 GCTATGATTCCCACTTCATAATTAA 3509 | ||||||| ||| || | ||||| Sbjct 38678 GATATGATTGCCATTTATTTATTAA 38702 Score = 87.8 bits (96), Expect = 4e-13 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 3367 GATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCC 3426 ||||||||| |||||| || || || || ||||| || ||| ||||| ||||| || Sbjct 33344 GATAAAGTTCTTGATCACTGCCATTTAACTGGTAAATATCGAGGAGCTGCTCATAATTCT 33403 Query 3427 TGTAACGTTAATTATCAAAAATCT-ACCATTATCCCAGTTGTCTTTCATAATTTATCCGG 3485 ||||| | |||||||||| | |||| || ||||| || |||||||||||||| || Sbjct 33404 TGTAATCTAAATTATCAAATTCCAGACCAC-ATACCAGTGGTATTTCATAATTTATCTGG 33462 Query 3486 CTATGATTCCCACTT 3500 |||||| ||| || Sbjct 33463 ATATGATAGCCATTT 33477 Score = 80.6 bits (88), Expect = 5e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 4622 CTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGA 4681 |||| ||||| || |||| | | || | |||||||||||||||| | || |||||||||| Sbjct 34602 CTAAAAATGAATTTGAAAGAGAATTCTTTAAATTAATGAATAATTCTGTATTTGGAAAGA 34661 Query 4682 CGATGGAGAATGTACGAAA 4700 |||| ||||| || ||||| Sbjct 34662 CGATTGAGAACGTTCGAAA 34680 Score = 80.6 bits (88), Expect = 5e-11 Identities = 155/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 4472 ATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAG 4531 |||| | || || || ||||| ||||| |||||| | | | |||||||| ||| Sbjct 39668 ATAAGGAAAAATACGTAATTCATCATAAATTATTGAAAGTTTATCTTGATTTAGGCTTAA 39727 Query 4532 TTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATA 4591 | || ||||| || | | | | ||| | |||| | ||| | ||||||||| Sbjct 39728 AATTAAAAAAAATTCATAAAATTATTAGGTTTAAAGAATCTAATTGGATGAAATCATATG 39787 Query 4592 TCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATA 4651 | ||| || |||| | || | |||| ||||| ||||||||| | || | || Sbjct 39788 TGGATTTTAACACCGAGAGAAGAGCCCAGTCTAAAAATGAATTCGAAAAAGAATTCTTTA 39847 Query 4652 AATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700 |||||||||||||| |||||||||| || || || || || || |||| Sbjct 39848 AATTAATGAATAATTCGGTTTTTGGTAAAACAATCGAAAACGTTAGAAA 39896 >seq1767 Length=1981 Score = 86.0 bits (94), Expect = 1e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 3367 GATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCC 3426 |||||||||| |||||||| || || || ||||| || ||| || || ||||| || Sbjct 630 GATAAAGTTTTGGATCATTGCCATTTAACCGGTAAATATCGAGGAGCGGCTCATAATTCT 571 Query 3427 TGTAACGTTAATTATCAAAAATCT-ACCATTATCCCAGTTGTCTTTCATAATTTATCCGG 3485 ||||| | |||||||| | | | ||| || ||||| || |||||||||||| | || Sbjct 570 TGTAATTTAAATTATCAGATTCCAGATCAT-ATTCCAGTCGTATTTCATAATTTAGCAGG 512 Query 3486 CTATGATTCCCACTTCATAATTAA 3509 ||||||| ||| || | ||||| Sbjct 511 ATATGATTGCCATTTATTTATTAA 488 >seq552 Length=460441 Score = 86.0 bits (94), Expect = 1e-12 Identities = 255/387 (66%), Gaps = 13/387 (3%) Strand=Plus/Plus Query 3816 ATTTTATTCAAAATTAACTAATTCTACCATTTCCGATGACGATTATGCTTTTGCTCAAGT 3875 ||||||||||||||||| | || || || ||||| ||||| | |||| || Sbjct 6759 ATTTTATTCAAAATTAAATGATAAAGGAATATCAGATGAAGATTACAATCATGCTAAAAA 6818 Query 3876 AGTCTGGAACGAGTTTAAAATCAATACGCTTGGAGAGTACTCGGACTTATA-CTTAAAGA 3934 || ||| | || ||| |||| || | || ||| || || ||||| |||||| | Sbjct 6819 TGTTTGGGAAGAATTTGAAATAAAAAATCTCAAAGAATATCACGATTTATATCTTAAA-A 6877 Query 3935 CTGATGTCCTTCTCTTGACTGATGTCTTTGAAAACTTTAGACGTAGTTGTTT--CAAGA- 3991 | ||||| | | || | ||||| || ||||| ||||| || ||| | | ||| Sbjct 6878 CAGATGTATTATTATTAGCCGATGTATTCGAAAAATTTAG----AGATGTATGCCTAGAG 6933 Query 3992 CA-TACAATTTAGACGCACTACACTTTTATACAGCACCAGGTCTTTCGAACGCTGCAATG 4050 || || || |||||| | | ||||||||| |||||||| | | ||| | Sbjct 6934 CATTATAAATTAGACCCGGCTTGGTATTATACAGCGCCAGGTCTGKCTTGGGATGCGTTA 6993 Query 4051 TTAAAGCATACTGAAGTAGAACTTGAACTGTTAACTGATCCTGAGATGCTTCTTTTCATT 4110 |||||| | | | | ||| || | || | ||| | ||| | ||| || | | || Sbjct 6994 TTAAAGAAAAGTAAGGTAAAATTGGATTTATTATCAGATATAAATATGGTTTTAATGATA 7053 Query 4111 GAAAAGGGTGTTCGCGGTGGGGTATCGATGTGTGCTAATAGACATGCTGAAGCTAACAAC 4170 |||||||| |||| || ||| |||| ||| |||| ||| || |||||||||| || Sbjct 7054 GAAAAGGGAATTCGAGGGGGGATATCAATGATAACTAAAAGATATTCTGAAGCTAATAAT 7113 Query 4171 CGGTATATGGGCAAAGATTTTGATTCA 4197 ||||||| ||| ||| |||| || Sbjct 7114 AAGTATATG---AAAAATTATGATCCA 7137 >seq223 Length=551926 Score = 86.0 bits (94), Expect = 1e-12 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 4534 CTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATC 4593 ||||| || || |||| |||| | | ||||| |||||| ||||||||| | || || Sbjct 176759 CTTAAAAATATTCACCGAGTCCTCACTTTTGATCAATCACCCTGGCTCAAGACTTACATA 176700 Query 4594 GATAAAAATACCGCATGC-CGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAA 4652 || ||||| | || || |||| || | ||||| || ||||| | |||| ||| Sbjct 176699 GACTTTAATAC-GAATAAACGCAAACAGGCGAGAAATGACTTTGAAAAGGATTTTTTTAA 176641 Query 4653 ATTAATGAATAATGCGGT-TTTTGGAAAGACGATGGAGAA 4691 | ||||||||||||| || ||||||||| || |||||||| Sbjct 176640 ACTAATGAATAATGCAGTCTTTTGGAAA-ACTATGGAGAA 176602 >seq14 Length=601095 Score = 86.0 bits (94), Expect = 1e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 4540 AAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAA 4599 ||||| |||| ||||| | || || ||||| ||||| || |||||||| Sbjct 596401 AAAATCCACCGCGTCTTAACCTTCGACCAATCGCCTTGGCTGAAGAATTATATCGACTTC 596342 Query 4600 AATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATG 4659 || |||| | ||||| | || || | || |||||| |||||| ||| |||||| Sbjct 596341 AACACCGAAAAAAGAAAAATGGCCCGCAACAATTTTGAAAAAGACTTTTTTAAGTTAATG 596282 Query 4660 AATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAA 4701 |||||| | || ||||| ||||||||||||||| | |||||| Sbjct 596281 AATAATTCCGTATTTGGCAAGACGATGGAGAATCTGCGAAAA 596240 >seq941 Length=408459 Score = 82.4 bits (90), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 4534 CTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATC 4593 ||||| || || |||| |||| | | ||||| |||||| ||||||||| | || || Sbjct 343114 CTTAAAAATATTCACCGAGTCCTCACTTTTGATCAATCACCCTGGCTCAAGACTTACATA 343173 Query 4594 GATAAAAATACCGCATGC-CGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAA 4652 || ||||| | || || || | || | ||||| || ||||| | |||| ||| Sbjct 343174 GACTTTAATAC-GAATAAACGCAAGCAGGCGAGAAATGACTTTGAAAAGGATTTTTTTAA 343232 Query 4653 ATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAA 4691 | ||||||||||||| || ||||| || || |||||||| Sbjct 343233 ACTAATGAATAATGCAGTCTTTGGGAAAACTATGGAGAA 343271 >seq2008 Length=1742 Score = 80.6 bits (88), Expect = 5e-11 Identities = 103/143 (72%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 3367 GATAAAGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCC 3426 ||||| |||| || || || || |||| || || || ||| || || ||||| | Sbjct 282 GATAAGGTTTTAGACCACTGCCATCTTACTGGAAAATATCGAGGAGCYGCTCATAATGCT 341 Query 3427 TGTAACGTTAATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGGC 3486 |||||| | |||||||||| | | | ||| |||||||| |||||||||||| | || Sbjct 342 TGTAACTTAAATTATCAAATTCCAAACCATATTCCAGTTGTATTTCATAATTTAGCGGGA 401 Query 3487 TATGATTCCCACTTCATAATTAA 3509 ||||||| || || | ||||| Sbjct 402 TATGATTGTCATTTGTTTATTAA 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97969383220848