Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1713 221 1e-52 seq3597 217 2e-51 >seq1713 Length=288524 Score = 221 bits (244), Expect = 1e-52 Identities = 587/892 (66%), Gaps = 17/892 (2%) Strand=Plus/Minus Query 21180 CCATTTTT-TGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGAT 21238 |||||||| ||||| || |||| || || || || || | ||||||||| | ||| Sbjct 285924 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 285865 Query 21239 ATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCT 21298 || ||||||||| |||||| ||| | | | | | || || |||| || | Sbjct 285864 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 285805 Query 21299 GATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCG 21358 | ||||| || | |||||||| || ||||||| ||| | | || ||||| || Sbjct 285804 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 285745 Query 21359 ATCAATTTTACA-GGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAAC 21417 | | | ||| ||||| || | ||| | || ||||| || || |||||| Sbjct 285744 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 285686 Query 21418 AATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA---AACATCAA 21474 ||| || | | | || | | | | || | | ||| ||||| |||||||| Sbjct 285685 AATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA--GTTTAGAGAACATCAA 285629 Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 |||||||||||||| || | |||||| || || || |||| ||||||||| |||||| Sbjct 285628 GCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTTAA 285569 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 || || | ||| || | |||||| ||||| ||||||| |||||||| || |||||||| Sbjct 285568 TCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAGAA 285509 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG-ATTCTTTATCCA 21653 ||| |||||||| ||||||||||| || | || ||| || ||| || | |||| | Sbjct 285508 AATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTT 285449 Query 21654 ATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTT 21713 | ||||| || | |||| ||||||| ||| |||| | ||||||||||| | Sbjct 285448 A-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGCAT 285390 Query 21714 TTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACA 21773 | || | | ||| ||||| || ||| | ||| ||| |||| Sbjct 285389 TAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACA 285330 Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC-TGAA 21832 |||| || || ||||| || || | | ||||| || |||||||||||||| || || | Sbjct 285329 TTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTA 285270 Query 21833 CATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCG 21892 | ||| || || | |||| || | | | ||||| ||| |||||||| ||||| Sbjct 285269 C-TTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCT 285211 Query 21893 GCAAAAAATGCCAATATATTTTTTATAAAATATCGT--TCGTTATCTGTTAATTTTTTCC 21950 |||||||| || | | |||| | |||| | | || | || || || | ||| Sbjct 285210 GCAAAAAAGGCTA--GCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACTCC 285153 Query 21951 AATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCT 22010 | || | |||||| || || |||||||| |||||||| | ||| | || | Sbjct 285152 AGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTT 285093 Query 22011 TTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 | || || | | ||| | || || |||||||||| ||||||||| Sbjct 285092 TCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCT 285041 >seq3597 Length=814645 Score = 217 bits (240), Expect = 2e-51 Identities = 587/892 (66%), Gaps = 17/892 (2%) Strand=Plus/Plus Query 21180 CCATTTTT-TGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGAT 21238 |||||||| ||||| || |||| || || || || || | ||||||||| | ||| Sbjct 809997 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 810056 Query 21239 ATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCT 21298 || ||||||||| |||||| ||| | | | | | || || |||| || | Sbjct 810057 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 810116 Query 21299 GATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCG 21358 | ||||| || | |||||||| || ||||||| ||| | | || ||||| || Sbjct 810117 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 810176 Query 21359 ATCAATTTTACA-GGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAAC 21417 | | | ||| ||||| || | ||| | || ||||| || || |||||| Sbjct 810177 AGGAGATG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACA 810235 Query 21418 AATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA---AACATCAA 21474 ||| || | | | || | | | | || | | ||| ||||| |||||||| Sbjct 810236 AATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA--GTTTAGAGAACATCAA 810292 Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 |||||||||||||| || | ||||||||| || || |||| ||||||||| |||||| Sbjct 810293 GCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTTAA 810352 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 || || | ||| || | |||||| ||||| ||||||| ||||| || || |||||||| Sbjct 810353 TCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAGAA 810412 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG-ATTCTTTATCCA 21653 ||| |||||||| ||||||||||| || | || ||| || ||| || | |||| | Sbjct 810413 AATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTT 810472 Query 21654 ATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTT 21713 | ||||| || | |||| ||||||| ||| |||| | ||||||||||| | Sbjct 810473 A-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGCAT 810531 Query 21714 TTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACA 21773 | || | | ||| ||||| || ||| | ||| ||| |||| Sbjct 810532 TAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACA 810591 Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC-TGAA 21832 |||| || || ||||| || || | | ||||| || |||||||||||||| || || | Sbjct 810592 TTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTA 810651 Query 21833 CATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCG 21892 | ||| || || | |||| || | | | ||||| ||| |||||||| ||||| Sbjct 810652 C-TTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCT 810710 Query 21893 GCAAAAAATGCCAATATATTTTTTATAAAATATCGT--TCGTTATCTGTTAATTTTTTCC 21950 |||||||| || | | |||| | |||| | | || | || || || | ||| Sbjct 810711 GCAAAAAAGGCTA--GCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACTCC 810768 Query 21951 AATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCT 22010 | || | |||||| || || |||||||| |||||||| | ||| | || | Sbjct 810769 AGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTT 810828 Query 22011 TTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 | || || | | ||| | || || |||||||||| ||||||||| Sbjct 810829 TCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCT 810880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531872130546880