Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1713 300 2e-76 seq3597 293 3e-74 seq25 140 4e-28 seq628 93.3 5e-14 >seq1713 Length=288524 Score = 300 bits (332), Expect = 2e-76 Identities = 623/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Minus Query 32991 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 33050 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 33051 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 33110 |||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 33111 tttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCAT 33170 | |||| || | || || |||||| || | || ||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 33171 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAA 33229 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 285702 Query 33230 TGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAAT 33289 || || || || ||||| ||||| | ||||| | ||| | | ||| Sbjct 285701 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 285645 Query 33290 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTT 33346 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 33347 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33406 | || || || | ||| || | || ||||||||||||| ||| ||||| | || | Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 33407 ATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC 33466 ||| ||||||||||| || || || ||||||||||| || | | ||| ||||| || Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCC--AAA 285467 Query 33467 CGGCGCTGTC-----ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 | || ||| | |||||||| || ||| | ||||| || | |||||||| Sbjct 285466 TGAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 285407 Query 33522 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33581 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 285406 GAAKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 285347 Query 33582 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33641 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 285346 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 285287 Query 33642 ACATCTAGCCTC-GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCA 33700 |||||| || || ||| | ||||||||| || |||| ||| | | |||||| | Sbjct 285286 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 285228 Query 33701 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 33760 | ||||| || |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 285227 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 285169 Query 33761 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 33819 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 285168 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 285109 Query 33820 AATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 | || || ||| || || || | | ||| | ||| || || ||||| || | Sbjct 285108 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 285049 Query 33880 ACAAATCTATTTGGATT 33896 ||||| |||| |||||| Sbjct 285048 ACAAACCTATGTGGATT 285032 >seq3597 Length=814645 Score = 293 bits (324), Expect = 3e-74 Identities = 622/917 (68%), Gaps = 20/917 (2%) Strand=Plus/Plus Query 32991 TTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGT 33050 |||||| |||| || || |||| || || || | || || || || || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 33051 TTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttt 33110 |||||||| | ||| || |||||||| || ||| || || | || | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 33111 tttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCAT 33170 | |||| || | || || |||||| || | || ||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 33171 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAA 33229 | || |||||||| | || | | |||||| || |||| |||| | ||| ||||| Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAA 810219 Query 33230 TGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAAT 33289 || || || || ||||| ||||| | ||||| | ||| | | ||| Sbjct 810220 TGTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAA-- 810276 Query 33290 GTTTA---AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTT 33346 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 33347 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33406 | || || || | ||| || | || ||||||||||||| ||| ||||| | || | Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 33407 ATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC 33466 | | ||||||||||| || || || ||||||||||| || | | ||| |||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAAT- 810455 Query 33467 CGGCGCTGTCATGTA-----TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 | || ||| | | ||||||| || ||| | ||||| || | |||||||| Sbjct 810456 -GAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGG 810514 Query 33522 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33581 | || || || |||||||| | | || ||||| | |||| || | |||||||| Sbjct 810515 GAAGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATC 810574 Query 33582 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33641 ||||||||||| |||||||| || || || || || || | || ||||| || || || Sbjct 810575 AATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAA 810634 Query 33642 ACATCTAGCCTC-GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCA 33700 |||||| || || ||| | ||||||||| || |||| ||| | | |||||| | Sbjct 810635 ACATCTTGCTTCTTGTACT-TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 810693 Query 33701 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 33760 | ||||| || |||||||||||||| || | || | | | ||| ||| || ||| Sbjct 810694 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTC-ACTG 810752 Query 33761 -GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 33819 || | || |||| ||||||||||||||| || || |||||||| ||||||||| Sbjct 810753 TCCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAA 810812 Query 33820 AATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 | || || ||| || || || | | ||| | ||| || || ||||| || | Sbjct 810813 ATGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAAT 810872 Query 33880 ACAAATCTATTTGGATT 33896 ||||| |||| |||||| Sbjct 810873 ACAAACCTATGTGGATT 810889 >seq25 Length=601041 Score = 140 bits (154), Expect = 4e-28 Identities = 241/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 || ||||| ||||| |||||||| ||| ||| || || ||||| || || | || Sbjct 247325 ATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCATTCTTT 247266 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 ||||| | ||| ||| || | || |||||||| || || ||||| ||||| |||| Sbjct 247265 GAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCAGACATG 247206 Query 63576 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63635 | | | |||||||||||||| || | | | ||| || |||||||| | || || Sbjct 247205 GTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTACCAGCATTAAACAGTGTTGGT 247146 Query 63636 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63695 || || || || |||||||| ||||| | |||||||| |||||||| || | || ||| Sbjct 247145 GATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAGCATCAATA 247086 Query 63696 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 63755 || ||| || || || ||||| | ||| | ||| ||||| || | |||| | | Sbjct 247085 TCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTTCAGCAACT 247026 Query 63756 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 ||| || || || | || ||| ||| | ||| || | ||| |||| Sbjct 247025 TTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 62624 TAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT 62683 ||||||| | || |||| |||||| ||||| || ||| |||||||||||||| || Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 62684 ATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGAT 62743 ||||| | ||| | | |||||||| || || || | ||||| ||||||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 62744 AGGTCTATGTCTCTTATTAGA 62764 ||||| || ||| ||||||| Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 >seq628 Length=1115932 Score = 93.3 bits (102), Expect = 5e-14 Identities = 165/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 33382 TTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCA 33441 || || ||||| || || | ||| || || || |||||||| |||||||| || |||||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 33442 AAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAA 33498 ||||||| | ||| || || | | || || ||| | ||||| | |||||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 33499 TCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt-tttC 33557 | || ||||| |||| || | |||| || ||||| || | |||||| ||| Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACA---AGTTTTGYTTC 724551 Query 33558 ATT--ACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614 || ||| |||| ||| | || ||||||||||| ||||| || || || || || Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 ||||||||| || || || || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 |||| || | ||| |||| || || ||||||||||| || |||||| | ||||| Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | | || ||||| || || || | || |||| | ||||||||||||| || Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGCAAA 724001 Query 33312 ATCGCAGTGCAGACCCT 33328 || || || || |||| Sbjct 724002 GTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622913623145920