Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3803 149 6e-31 seq4114 87.8 2e-12 >seq3803 Length=782546 Score = 149 bits (164), Expect = 6e-31 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || || || |||||| | || ||| | || | ||| ||| Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||| ||| | || ||| ||||||| ||||||||||| || || || || || Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||| ||||| | | || |||||||| ||||||| | | | |||||||| || Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAA 742701 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || ||||| || ||| | ||||| || |||||| | |||||||||| Sbjct 742702 CATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGGAA 742751 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || ||||||||||| | ||||| | ||| | ||| ||| | Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 26829 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || || || ||| ||| ||||||||||| || || || || || Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAA-ATTCAGGACAAAGAAGGCATCCCGCCAGACCA 742413 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | ||||| | || ||| ||||| || ||||||| | | | |||||||| || Sbjct 742414 ACAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAA 742473 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || |||||| | || || || ||||| | |||||||||| Sbjct 742474 CATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAGGTTGAGAGGAGGAA 742523 >seq4114 Length=678496 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929 ||| || || || || ||||| | ||||||| | || |||||||| ||||||| | Sbjct 195579 AGGTATCCCACCAGACCAACAGCGTCTCATTTTTGCTGGAAAACAACTTGAAGATGGACG 195520 Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAG 26989 || | || || ||||||||||| |||||||| ||| | ||||| || || |||||||| Sbjct 195519 AACACTGAGTGATTATAACATTCAGAAAGAATCCACTCTACATCTTGTGCTCAGACTTAG 195460 Query 26990 AGGAGG 26995 ||| || Sbjct 195459 AGGKGG 195454 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929 ||| || || || || ||||| | ||||||| | || |||||||| ||||||| | Sbjct 197826 AGGTATCCCACCAGACCAACAGCGTCTCATTTTTGCTGGAAAACAACTTGAAGATGGACG 197767 Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAG 26989 || | || || ||||||||||| |||||||| ||| | ||||| || || |||||||| Sbjct 197766 AACACTGAGTGATTATAACATTCAGAAAGAATCCACTCTACATCTTGTGCTCAGACTTAG 197707 Query 26990 AGG 26992 ||| Sbjct 197706 AGG 197704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478636600096640