Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq25 129 2e-24 seq1713 89.7 1e-12 seq3597 87.8 5e-12 >seq25 Length=601041 Score = 129 bits (142), Expect = 2e-24 Identities = 194/273 (71%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 |||||||| | ||| |||||| || ||||||||| | ||| | || ||| |||||||| Sbjct 247015 ATCAATGGCAAAGTTGCTGAACGTCCACAGCATATGCTGATGAGAGTCGCTGTTGGTATC 247074 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| | ||| ||||||| || ||||| ||||| || ||| || || ||| Sbjct 247075 CATGGTGAAGATATTGATGCTGCCATTGAGACATACAATCTTTTATCTGAGAAATGGTTC 247134 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || || || | |||||| ||| |||||||| ||| | | |||||||||||| || Sbjct 247135 ACTCATGCATCACCAACACTGTTTAATGCTGGTACTTGCAGACCACAGATGTCTAGCTG- 247193 Query 363610 TTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 |||||| | | ||| || || ||| || || |||| ||| || || |||| || Sbjct 247194 TTTCTTGTTGACCATGTCTGATGACAGCATTGAAGGCATCTATGAGACTCTCAAGACATG 247253 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGG 363701 ||| || || || |||||||| || |||||||| Sbjct 247254 TGCACTGATCTCAAAGAATGCTGGTGGAATTGG 247286 >seq1713 Length=288524 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 | |||||||||| ||||| || |||||||||||||| |||||| ||||| || ||| Sbjct 285483 TWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCATTTGCAGCAATATTCTGGT 285542 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 | ||||| |||| | | || || |||| || ||||| |||| ||| |||| | Sbjct 285543 TTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAACTAATCAGCAGAGAYG 285602 Query 22619 AGGGTCTTCATACCGATTTTGCGTG 22643 | |||||||| |||||||| || Sbjct 285603 AAGGTCTTCACTGTGATTTTGCATG 285627 >seq3597 Length=814645 Score = 87.8 bits (96), Expect = 5e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 | |||||||||| ||||| || |||||||||||||| || ||| ||||| || ||| Sbjct 810438 TWGCATTTGCTGCAGTTGAGGGGATTTTCTTTTCTGGTGCTTTTGCAGCAATATTCTGGT 810379 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 | ||||| |||| | | || || |||| || ||||| |||| ||| |||||| Sbjct 810378 TTAAAAAGCGTGGGTTATTACCAGGATTAACACACTCTAATGAACTAATCAGCAGAGATG 810319 Query 22619 AGGGTCTTCATACCGATTTTGCGTG 22643 | |||||||| |||||||| || Sbjct 810318 AAGGTCTTCACTGTGATTTTGCATG 810294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303281592971984