Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3803 138 1e-27 seq1363 84.2 2e-11 >seq3803 Length=782546 Score = 138 bits (152), Expect = 1e-27 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || |||||| | |||||| | || ||||| | | Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| ||| | || ||| ||||||| |||||||||||||| || || || || Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || || || | | || || ||||| ||||||| | | | | ||||| || || Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAA 742701 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || ||||| || || ||||| | || | ||||||||||||||| Sbjct 742702 CATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGGA 742750 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||||||| | || || | |||||||| | | | Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 24051 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || || || ||| ||| |||||||||||||| || || || || Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAA-ATTCAGGACAAAGAAGGCATCCCGCCAGACCA 742413 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | || || | || ||| || || || ||||||| | | | | ||||| || || Sbjct 742414 ACAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAA 742473 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || || || ||||| |||| | || | || |||||||||||| Sbjct 742474 CATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAGGTTGAGAGGAGGA 742522 >seq1363 Length=349685 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24088 AAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||||||||| | || || || ||| | || || | || ||||| || ||||||| Sbjct 271866 AAGAAGGCATTGCACCAGACCAGCAGCGTCTTATATTTCAAGGGAAGCAGCTTGAAGATG 271807 Query 24148 ACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGAT 24207 || || |||| || |||| |||| ||||||| || ||| |||| | | |||||||| Sbjct 271806 GCAAAAGTCTCAGTGACTATAGCATTGAAAAAGAGTCAACACTTCAACTTGCGTTAAGAT 271747 Query 24208 TGAGAGGAGGA 24218 ||||||||||| Sbjct 271746 TGAGAGGAGGA 271736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429913405788360